RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 DCUN1D2Q6PH85 259 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 ZNF662Q6ZS27 426 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 FAM183BPQ6ZVS7 135 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 PDZD4Q76G19 769 aaPredicted RBP13.03□□□□□ -0.32
SNX17-208ENST00000493711 GPR149Q86SP6 731 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 GPR152Q8TDT2 470 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 RFFLQ8WZ73 363 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 MRPS31Q92665 395 aaKnown RBP13.03□□□□□ -0.32
SNX17-208ENST00000493711 FAM149B1Q96BN6 582 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 ZNF707Q96C28 371 aaPredicted RBP13.03□□□□□ -0.32
SNX17-208ENST00000493711 RIPOR3Q96MK2 946 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 NCAPGQ9BPX3 1015 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 CORO1BQ9BR76 489 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 THAP2Q9H0W7 228 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 ADAM7Q9H2U9 754 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 POPDC2Q9HBU9 364 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 CLDND1Q9NY35 253 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 CHD9Q3L8U1 2897 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 CLUHO75153 1309 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 GBF1Q92538 1859 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 GOLGA6L9A6NEM1 432 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 PJA2O43164 708 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 KRT86O43790 486 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 DAB1O75553 588 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 GLP2RO95838 553 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 ZDHHC11BP0C7U3 371 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 RRM1P23921 792 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 GTF2F1P35269 517 aaKnown RBP eCLIP13.02□□□□□ -0.33
SNX17-208ENST00000493711 MTHFRP42898 656 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 USP46P62068 366 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 IFRD2Q12894 506 aaPredicted RBP13.02□□□□□ -0.33
SNX17-208ENST00000493711 MAMLD1Q13495 774 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 MTMR3Q13615 1198 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 ATAT1Q5SQI0 421 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 RARS2Q5T160 578 aaKnown RBP13.02□□□□□ -0.33
SNX17-208ENST00000493711 BSPRYQ5W0U4 402 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 MICALL1Q8N3F8 863 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 RNF139Q8WU17 664 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 UBE2Q2Q8WVN8 375 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 FAM122AQ96E09 287 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 NECTIN4Q96NY8 510 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 LRRC3Q9BY71 257 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 KCNF1Q9H3M0 494 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 CTTNBP2NLQ9P2B4 639 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 STAP1Q9ULZ2 295 aa13.02□□□□□ -0.33
SNX17-208ENST00000493711 ZNF840PA6NDX5 716 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 YJEFN3A6XGL0 299 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 E7ENQ6 273 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 GOLGA8SH3BPF8 625 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 PIK3R2O00459 728 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 CAPN9O14815 690 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 LINC01565O15544 149 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 MTA2O94776 668 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 F11P03951 625 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 RHOP08100 348 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 MYL4P12829 197 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 GABRR2P28476 465 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 NOS2P35228 1153 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 MATKP42679 507 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 KPNA1P52294 538 aaPredicted RBP13.01□□□□□ -0.33
SNX17-208ENST00000493711 HADHBP55084 474 aaKnown RBP13.01□□□□□ -0.33
SNX17-208ENST00000493711 HECTD3Q5T447 861 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 KLHDC10Q6PID8 442 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 SYCE2Q6PIF2 218 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 TMC5Q6UXY8 1006 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 TMC8Q8IU68 726 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 ACRBPQ8NEB7 543 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 FEZF2Q8TBJ5 459 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 FNIP1Q8TF40 1166 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 ZNF830Q96NB3 372 aaPredicted RBP13.01□□□□□ -0.33
SNX17-208ENST00000493711 SLC2A13Q96QE2 648 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNX17-208ENST00000493711 GMIPQ9P107 970 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 CLEC1BQ9P126 229 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 DNMT3BQ9UBC3 853 aaKnown RBP13.01□□□□□ -0.33
SNX17-208ENST00000493711 MYO1AQ9UBC5 1043 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 TMEM59LQ9UK28 342 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 COG5Q9UP83 839 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 PPP2R2CQ9Y2T4 447 aa13.01□□□□□ -0.33
SNX17-208ENST00000493711 REXO2Q9Y3B8 237 aaKnown RBP13.01□□□□□ -0.33
SNX17-208ENST00000493711 A0A1W2PQH9 124 aa13□□□□□ -0.33
SNX17-208ENST00000493711 TCRBV5S1A1TA0A578 114 aa13□□□□□ -0.33
SNX17-208ENST00000493711 TMEM191CA6NGB0 347 aa13□□□□□ -0.33
SNX17-208ENST00000493711 MYO1FO00160 1098 aa13□□□□□ -0.33
SNX17-208ENST00000493711 GBP1P32455 592 aa13□□□□□ -0.33
SNX17-208ENST00000493711 ARHGAP25P42331 645 aa13□□□□□ -0.33
SNX17-208ENST00000493711 PTPN9P43378 593 aa13□□□□□ -0.33
SNX17-208ENST00000493711 RBM10P98175 930 aaKnown RBP13□□□□□ -0.33
SNX17-208ENST00000493711 MTA1Q13330 715 aa13□□□□□ -0.33
SNX17-208ENST00000493711 ACAP1Q15027 740 aa13□□□□□ -0.33
SNX17-208ENST00000493711 ARHGAP29Q52LW3 1261 aa13□□□□□ -0.33
SNX17-208ENST00000493711 C2CD6Q53TS8 623 aa13□□□□□ -0.33
SNX17-208ENST00000493711 EP400NLQ6ZTU2 488 aa13□□□□□ -0.33
SNX17-208ENST00000493711 RSRC2Q7L4I2 434 aaKnown RBP13□□□□□ -0.33
SNX17-208ENST00000493711 GRASPQ7Z6J2 395 aaPredicted RBP13□□□□□ -0.33
SNX17-208ENST00000493711 SCD5Q86SK9 330 aa13□□□□□ -0.33
SNX17-208ENST00000493711 RNF10Q8N5U6 811 aaKnown RBP13□□□□□ -0.33
SNX17-208ENST00000493711 C12orf76Q8N812 135 aaPredicted RBP13□□□□□ -0.33
SNX17-208ENST00000493711 MSLNLQ96KJ4 702 aa13□□□□□ -0.33
SNX17-208ENST00000493711 DESI2Q9BSY9 194 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms