RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 DPP6P42658 865 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 NDST1P52848 882 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 MAP3K7CLP57077 242 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 STK4Q13043 487 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 SGSM1Q2NKQ1 1148 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 ZACNQ401N2 412 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 PEAR1Q5VY43 1037 aaPredicted RBP18.37■□□□□ 0.53
COL9A1-210ENST00000493682 SLC23A3Q6PIS1 610 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 UNQ6494/PRO21346Q6UXR6 183 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 NUDT18Q6ZVK8 323 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 HTR3DQ70Z44 454 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 MIB1Q86YT6 1006 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 C12orf29Q8N999 325 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 KIAA0895Q8NCT3 520 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 TMEM174Q8WUU8 243 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 KLF16Q9BXK1 252 aaPredicted RBP18.37■□□□□ 0.53
COL9A1-210ENST00000493682 FBXO44Q9H4M3 255 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 TLR8Q9NR97 1041 aaKnown RBP18.37■□□□□ 0.53
COL9A1-210ENST00000493682 FAM49BQ9NUQ9 324 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 DNAJC17Q9NVM6 304 aaKnown RBP18.37■□□□□ 0.53
COL9A1-210ENST00000493682 STARD13Q9Y3M8 1113 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 ATXN2Q99700 1313 aaKnown RBP18.37■□□□□ 0.53
COL9A1-210ENST00000493682 PLXND1Q9Y4D7 1925 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 A0A1W2PQF6 199 aa18.36■□□□□ 0.53
COL9A1-210ENST00000493682 AP5Z1O43299 807 aa18.36■□□□□ 0.53
COL9A1-210ENST00000493682 RPN1P04843 607 aaKnown RBP18.36■□□□□ 0.53
COL9A1-210ENST00000493682 SLFN14P0C7P3 912 aa18.36■□□□□ 0.53
COL9A1-210ENST00000493682 HOXB2P14652 356 aa18.36■□□□□ 0.53
COL9A1-210ENST00000493682 NTSR1P30989 418 aa18.36■□□□□ 0.53
COL9A1-210ENST00000493682 HOXD12P35452 270 aa18.36■□□□□ 0.53
COL9A1-210ENST00000493682 WASP42768 502 aa18.36■□□□□ 0.53
COL9A1-210ENST00000493682 EGFLAMQ63HQ2 1017 aa18.36■□□□□ 0.53
COL9A1-210ENST00000493682 GRAMD4Q6IC98 578 aa18.36■□□□□ 0.53
COL9A1-210ENST00000493682 UNC93AQ86WB7 457 aa18.36■□□□□ 0.53
COL9A1-210ENST00000493682 CEP57L1Q8IYX8 460 aa18.36■□□□□ 0.53
COL9A1-210ENST00000493682 DEFB119Q8N690 84 aa18.36■□□□□ 0.53
COL9A1-210ENST00000493682 KCTD10Q9H3F6 313 aa18.36■□□□□ 0.53
COL9A1-210ENST00000493682 CALCOCO1Q9P1Z2 691 aa18.36■□□□□ 0.53
COL9A1-210ENST00000493682 SERTAD1Q9UHV2 236 aa18.36■□□□□ 0.53
COL9A1-210ENST00000493682 CHD6Q8TD26 2715 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 NEDD8-MDP1E9PL57 170 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 CACNG3O60359 315 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 ASS1P00966 412 aaKnown RBP18.35■□□□□ 0.53
COL9A1-210ENST00000493682 NR3C1P04150 777 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 CFIP05156 583 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 ZSCAN22P10073 491 aaPredicted RBP18.35■□□□□ 0.53
COL9A1-210ENST00000493682 ASPAP45381 313 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 RPL6Q02878 288 aaKnown RBP18.35■□□□□ 0.53
COL9A1-210ENST00000493682 SPOPLQ6IQ16 392 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 SLC36A4Q6YBV0 504 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 SV2AQ7L0J3 742 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 GPRIN1Q7Z2K8 1008 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 TMC2Q8TDI7 906 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 TAF4BQ92750 862 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 PAGE5Q96GU1 130 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 ACOX2Q99424 681 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 BBS2Q9BXC9 721 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 TMEM121BQ9BXQ6 578 aaPredicted RBP18.35■□□□□ 0.53
COL9A1-210ENST00000493682 BACH2Q9BYV9 841 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 CYLDQ9NQC7 956 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 FSCN3Q9NQT6 498 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 EXOC1Q9NV70 894 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 OSER1Q9NX31 292 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 SCML2Q9UQR0 700 aa18.35■□□□□ 0.53
COL9A1-210ENST00000493682 CYP26A1O43174 497 aa18.34■□□□□ 0.53
COL9A1-210ENST00000493682 ACTN4O43707 911 aaKnown RBP18.34■□□□□ 0.53
COL9A1-210ENST00000493682 F13A1P00488 732 aa18.34■□□□□ 0.53
COL9A1-210ENST00000493682 FAM200BP0CF97 657 aa18.34■□□□□ 0.53
COL9A1-210ENST00000493682 TYRP14679 529 aa18.34■□□□□ 0.53
COL9A1-210ENST00000493682 ADORA2BP29275 332 aa18.34■□□□□ 0.53
COL9A1-210ENST00000493682 ATP5C1P36542 298 aaKnown RBP18.34■□□□□ 0.53
COL9A1-210ENST00000493682 DUOXA1Q1HG43 343 aa18.34■□□□□ 0.53
COL9A1-210ENST00000493682 KMT5BQ4FZB7 885 aa18.34■□□□□ 0.53
COL9A1-210ENST00000493682 C1orf220Q5T0J3 134 aa18.34■□□□□ 0.53
COL9A1-210ENST00000493682 TPGS1Q6ZTW0 290 aa18.34■□□□□ 0.53
COL9A1-210ENST00000493682 XPO6Q96QU8 1125 aaKnown RBP18.34■□□□□ 0.53
COL9A1-210ENST00000493682 SCNM1Q9BWG6 230 aa18.34■□□□□ 0.53
COL9A1-210ENST00000493682 ADAM33Q9BZ11 813 aa18.34■□□□□ 0.53
COL9A1-210ENST00000493682 CD248Q9HCU0 757 aa18.34■□□□□ 0.53
COL9A1-210ENST00000493682 MARK1Q9P0L2 795 aa18.34■□□□□ 0.53
COL9A1-210ENST00000493682 WDR35Q9P2L0 1181 aa18.34■□□□□ 0.53
COL9A1-210ENST00000493682 ZMIZ1Q9ULJ6 1067 aa18.34■□□□□ 0.53
COL9A1-210ENST00000493682 SLC6A14Q9UN76 642 aa18.34■□□□□ 0.53
COL9A1-210ENST00000493682 MYO18AQ92614 2054 aaKnown RBP18.34■□□□□ 0.53
COL9A1-210ENST00000493682 IGHV1OR15-9A0A0B4J2B8 117 aa18.33■□□□□ 0.52
COL9A1-210ENST00000493682 PRRT4C9JH25 899 aa18.33■□□□□ 0.52
COL9A1-210ENST00000493682 HHLA1C9JL84 531 aa18.33■□□□□ 0.52
COL9A1-210ENST00000493682 PDXKO00764 312 aa18.33■□□□□ 0.52
COL9A1-210ENST00000493682 IKBKBO14920 756 aa18.33■□□□□ 0.52
COL9A1-210ENST00000493682 PIK3CAP42336 1068 aa18.33■□□□□ 0.52
COL9A1-210ENST00000493682 ZNF33AQ06730 810 aa18.33■□□□□ 0.52
COL9A1-210ENST00000493682 GOLGA8FQ08AF8 430 aa18.33■□□□□ 0.52
COL9A1-210ENST00000493682 GOLGA8DPQ0D2H9 430 aa18.33■□□□□ 0.52
COL9A1-210ENST00000493682 SEMA3BQ13214 749 aa18.33■□□□□ 0.52
COL9A1-210ENST00000493682 CEP135Q66GS9 1140 aa18.33■□□□□ 0.52
COL9A1-210ENST00000493682 ATL3Q6DD88 541 aa18.33■□□□□ 0.52
COL9A1-210ENST00000493682 SDE2Q6IQ49 451 aa18.33■□□□□ 0.52
COL9A1-210ENST00000493682 KIAA1211LQ6NV74 962 aa18.33■□□□□ 0.52
COL9A1-210ENST00000493682 CLEC20AQ6ZU45 233 aa18.33■□□□□ 0.52
COL9A1-210ENST00000493682 TOGARAM2Q6ZUX3 1019 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms