RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 UBE4BO95155 1302 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 NBEAQ8NFP9 2946 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 IGHV1OR15-9A0A0B4J2B8 117 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 A0A1W2PQF6 199 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 NEDD8-MDP1E9PL57 170 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 SPTLC2O15270 562 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 ZBTB24O43167 697 aaPredicted RBP13.05□□□□□ -0.32
SAMM50-205ENST00000493621 EXOC3O60645 756 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 ZDHHC11BP0C7U3 371 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 CASP1P29466 404 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 PGFP49763 221 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 SNRPFP62306 86 aaKnown RBP13.05□□□□□ -0.32
SAMM50-205ENST00000493621 FAM193AP78312 1265 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 ZNF667Q5HYK9 610 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 SDE2Q6IQ49 451 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 RABEPKQ7Z6M1 372 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 ACOT1Q86TX2 421 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 SLC41A1Q8IVJ1 513 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 CHPFQ8IZ52 775 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 FUKQ8N0W3 1084 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 LINC00301Q8NCQ3 95 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 PLEKHO2Q8TD55 490 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 TNIP3Q96KP6 325 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 HSPA12BQ96MM6 686 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 ACOX2Q99424 681 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 DUSP9Q99956 384 aaKnown RBP13.05□□□□□ -0.32
SAMM50-205ENST00000493621 C7orf25Q9BPX7 421 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 SDCBP2Q9H190 292 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 ZSCAN16Q9H4T2 348 aaPredicted RBP13.05□□□□□ -0.32
SAMM50-205ENST00000493621 FOXD4L1Q9NU39 408 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 COMMD8Q9NX08 183 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 CYP8B1Q9UNU6 501 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 MSRB2Q9Y3D2 182 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 STARD13Q9Y3M8 1113 aa13.05□□□□□ -0.32
SAMM50-205ENST00000493621 FAM92AA1XBS5 289 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 ARHGAP33O14559 1287 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 TLR5O60602 858 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 ZNF217O75362 1048 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 BEST1O76090 585 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 TBX18O95935 607 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 CCDC130P13994 396 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 TYRP14679 529 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 NDUFV2P19404 249 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 RDXP35241 583 aaKnown RBP13.04□□□□□ -0.32
SAMM50-205ENST00000493621 MAP3K7CLP57077 242 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 EHHADHQ08426 723 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 ORC1Q13415 861 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 NCOA4Q13772 614 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 CNNM4Q6P4Q7 775 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 TPGS1Q6ZTW0 290 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 UNC13DQ70J99 1090 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 HTR3DQ70Z44 454 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 C12orf56Q8IXR9 622 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 CHCHD4Q8N4Q1 142 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 TRIML1Q8N9V2 468 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 IQUBQ8NA54 791 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 ZMIZ2Q8NF64 920 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 IPO4Q8TEX9 1081 aaKnown RBP13.04□□□□□ -0.32
SAMM50-205ENST00000493621 XPO6Q96QU8 1125 aaKnown RBP13.04□□□□□ -0.32
SAMM50-205ENST00000493621 SMOQ99835 787 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 BBS2Q9BXC9 721 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 KLF16Q9BXK1 252 aaPredicted RBP13.04□□□□□ -0.32
SAMM50-205ENST00000493621 BLZF1Q9H2G9 400 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 VRTNQ9H8Y1 702 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 SLC39A2Q9NP94 309 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 TLR8Q9NR97 1041 aaKnown RBP13.04□□□□□ -0.32
SAMM50-205ENST00000493621 TFIP11Q9UBB9 837 aaKnown RBP13.04□□□□□ -0.32
SAMM50-205ENST00000493621 RAD54BQ9Y620 910 aa13.04□□□□□ -0.32
SAMM50-205ENST00000493621 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.03□□□□□ -0.32
SAMM50-205ENST00000493621 LRRIQ3A6PVS8 624 aaPredicted RBP13.03□□□□□ -0.32
SAMM50-205ENST00000493621 PRRT4C9JH25 899 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 H0Y626 953 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 STX6O43752 255 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 CACNG3O60359 315 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 GREM1O60565 184 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 PPP6R2O75170 966 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 TRIM16O95361 564 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 VNN1O95497 513 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 SYPP08247 313 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 CD59P13987 128 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 KNOP1Q1ED39 458 aaKnown RBP13.03□□□□□ -0.32
SAMM50-205ENST00000493621 BMT2Q1RMZ1 405 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 SHC4Q6S5L8 630 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 TOGARAM2Q6ZUX3 1019 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 RGL4Q8IZJ4 473 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 SLC2A14Q8TDB8 520 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 PARD3BQ8TEW8 1205 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 GABRG3Q99928 467 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 SLC6A17Q9H1V8 727 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 FBXO44Q9H4M3 255 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 CD248Q9HCU0 757 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 CD93Q9NPY3 652 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 FAM49BQ9NUQ9 324 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 WDR35Q9P2L0 1181 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 CGNQ9P2M7 1197 aaKnown RBP13.03□□□□□ -0.32
SAMM50-205ENST00000493621 HMGXB4Q9UGU5 601 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 LSM7Q9UK45 103 aaKnown RBP13.03□□□□□ -0.32
SAMM50-205ENST00000493621 ANKRD11Q6UB99 2663 aaPredicted RBP13.03□□□□□ -0.32
SAMM50-205ENST00000493621 ITPR1Q14643 2758 aa13.03□□□□□ -0.32
SAMM50-205ENST00000493621 A0A1W2PQD8 194 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms