RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 DSG3P32926 999 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 GPC1P35052 558 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 VHLP40337 213 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 TGM3Q08188 693 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 PLD1Q13393 1074 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 PAN2Q504Q3 1202 aaKnown RBP16.8■□□□□ 0.28
BRAT1-206ENST00000493232 FAM131BQ86XD5 332 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 ABRAQ8N0Z2 381 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 KIF2BQ8N4N8 673 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 NFIBO00712 420 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 CXCL11O14625 94 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 IFNA14P01570 189 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 TKTL1P51854 596 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 SEC24CP53992 1094 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 SEL1L3Q68CR1 1132 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 MICU2Q8IYU8 434 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 JADE3Q92613 823 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 SH3GL1Q99961 368 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 FBXO44Q9H4M3 255 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 BARX2Q9UMQ3 279 aaPredicted RBP16.8■□□□□ 0.28
BRAT1-206ENST00000493232 RAP1GAPP47736 663 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 CDC16Q13042 620 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 PAPD7Q5XG87 772 aaKnown RBP16.8■□□□□ 0.28
BRAT1-206ENST00000493232 PAFAH2Q99487 392 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 MTFR1LQ9H019 292 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 SEPT3Q9UH03 358 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 ALDH2P05091 517 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 RRM2P31350 389 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 CHI3L1P36222 383 aaPredicted RBP16.8■□□□□ 0.28
BRAT1-206ENST00000493232 PGM5Q15124 567 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 CYP51A1Q16850 503 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 STRA8Q7Z7C7 330 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 SLC22A9Q8IVM8 553 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 LRRC34Q8IZ02 419 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 SPIRE2Q8WWL2 714 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 SYT15Q9BQS2 421 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 MTG1Q9BT17 334 aaPredicted RBP16.8■□□□□ 0.28
BRAT1-206ENST00000493232 PCDHB12Q9Y5F1 795 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 JCHAINP01591 159 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 CPA2P48052 419 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 TOB1P50616 345 aaPredicted RBP16.79■□□□□ 0.28
BRAT1-206ENST00000493232 UBE3AQ05086 875 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 CHRNB3Q05901 458 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 CHMP1BQ7LBR1 199 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 SLC24A3Q9HC58 644 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 AKAP3O75969 853 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 ACADSP16219 412 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 AXLP30530 894 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 CCR1P32246 355 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 SV2AQ7L0J3 742 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 CCDC60Q8IWA6 550 aaPredicted RBP16.79■□□□□ 0.28
BRAT1-206ENST00000493232 EPS8L3Q8TE67 593 aaKnown RBP16.79■□□□□ 0.28
BRAT1-206ENST00000493232 CASP10Q92851 521 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 NCKIPSDQ9NZQ3 722 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 TMCC3Q9ULS5 477 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 PCDHB5Q9Y5E4 795 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 STRNO43815 780 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 MRPS35P82673 323 aaKnown RBP16.79■□□□□ 0.28
BRAT1-206ENST00000493232 MGAT5Q09328 741 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 MPP3Q13368 585 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 RETSATQ6NUM9 610 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 TTC33Q6PID6 262 aaPredicted RBP16.79■□□□□ 0.28
BRAT1-206ENST00000493232 CENPLQ8N0S6 344 aaPredicted RBP16.79■□□□□ 0.28
BRAT1-206ENST00000493232 PNKPQ96T60 521 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 HEY2Q9UBP5 337 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 DDTLA6NHG4 134 aaPredicted RBP16.79■□□□□ 0.28
BRAT1-206ENST00000493232 PLA2G6O60733 806 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 DARSP14868 501 aaKnown RBP16.79■□□□□ 0.28
BRAT1-206ENST00000493232 TMEM154Q6P9G4 183 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 NT5DC4Q86YG4 428 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 ZCWPW1Q9H0M4 648 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 ASB7Q9H672 318 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 TFR2Q9UP52 801 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 V9GYQ6 96 aa16.79■□□□□ 0.28
BRAT1-206ENST00000493232 GRIK4Q16099 956 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 CYP4Z1Q86W10 505 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 MDM1Q8TC05 714 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 PCDH9Q9HC56 1237 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 VTA1Q9NP79 307 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 TM9SF1O15321 606 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 CXCL8P10145 99 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 CENPAP49450 140 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 ZNF438Q7Z4V0 828 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 OSMRQ99650 979 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 GPAMQ9HCL2 828 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 DDX43Q9NXZ2 648 aaKnown RBP16.78■□□□□ 0.28
BRAT1-206ENST00000493232 CAB39Q9Y376 341 aaPredicted RBP16.78■□□□□ 0.28
BRAT1-206ENST00000493232 UBXN8O00124 270 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 RGL2O15211 777 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 DDHD2O94830 711 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 CYP2F1P24903 491 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 PMS1P54277 932 aaKnown RBP16.78■□□□□ 0.28
BRAT1-206ENST00000493232 FBXW10Q5XX13 1052 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 TAF2Q6P1X5 1199 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 IYDQ6PHW0 289 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 BNC2Q6ZN30 1099 aaPredicted RBP16.78■□□□□ 0.28
BRAT1-206ENST00000493232 POP1Q99575 1024 aaKnown RBP16.78■□□□□ 0.28
BRAT1-206ENST00000493232 NT5MQ9NPB1 228 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 CAPN6Q9Y6Q1 641 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 MGAT4DA6NG13 374 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms