RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 LCLAT1Q6UWP7 414 aa25.94■■□□□ 1.74
UPF3A-209ENST00000492270 BHLHA9Q7RTU4 235 aa25.94■■□□□ 1.74
UPF3A-209ENST00000492270 TBC1D14Q9P2M4 693 aa25.94■■□□□ 1.74
UPF3A-209ENST00000492270 DACH1Q9UI36 760 aa25.94■■□□□ 1.74
UPF3A-209ENST00000492270 WDR87Q6ZQQ6 2873 aa25.93■■□□□ 1.74
UPF3A-209ENST00000492270 ZBED1O96006 694 aa25.93■■□□□ 1.74
UPF3A-209ENST00000492270 SETSIPP0DME0 302 aa25.93■■□□□ 1.74
UPF3A-209ENST00000492270 DRD1P21728 446 aa25.93■■□□□ 1.74
UPF3A-209ENST00000492270 PLA2G4AP47712 749 aa25.93■■□□□ 1.74
UPF3A-209ENST00000492270 LY6G5CQ5SRR4 150 aa25.93■■□□□ 1.74
UPF3A-209ENST00000492270 C12orf40Q86WS4 652 aa25.93■■□□□ 1.74
UPF3A-209ENST00000492270 ZBTB44Q8NCP5 570 aa25.93■■□□□ 1.74
UPF3A-209ENST00000492270 LRRC4Q9HBW1 653 aa25.93■■□□□ 1.74
UPF3A-209ENST00000492270 ZSCAN32Q9NX65 697 aa25.93■■□□□ 1.74
UPF3A-209ENST00000492270 CLIC5Q9NZA1 410 aa25.93■■□□□ 1.74
UPF3A-209ENST00000492270 ANTXRLA6NF34 631 aa25.92■■□□□ 1.74
UPF3A-209ENST00000492270 K7ESF4 209 aa25.92■■□□□ 1.74
UPF3A-209ENST00000492270 M0QYV0 167 aa25.92■■□□□ 1.74
UPF3A-209ENST00000492270 RALAP11233 206 aa25.92■■□□□ 1.74
UPF3A-209ENST00000492270 KRT5P13647 590 aa25.92■■□□□ 1.74
UPF3A-209ENST00000492270 SLC6A11P48066 632 aa25.92■■□□□ 1.74
UPF3A-209ENST00000492270 RGS7P49802 495 aa25.92■■□□□ 1.74
UPF3A-209ENST00000492270 YWHAGP61981 247 aaKnown RBP eCLIP25.92■■□□□ 1.74
UPF3A-209ENST00000492270 DMWDQ09019 674 aa25.92■■□□□ 1.74
UPF3A-209ENST00000492270 MESP2Q0VG99 397 aa25.92■■□□□ 1.74
UPF3A-209ENST00000492270 CNGA2Q16280 664 aa25.92■■□□□ 1.74
UPF3A-209ENST00000492270 PM20D1Q6GTS8 502 aa25.92■■□□□ 1.74
UPF3A-209ENST00000492270 KLHDC10Q6PID8 442 aa25.92■■□□□ 1.74
UPF3A-209ENST00000492270 GBP6Q6ZN66 633 aa25.92■■□□□ 1.74
UPF3A-209ENST00000492270 RBM43Q6ZSC3 357 aaKnown RBP25.92■■□□□ 1.74
UPF3A-209ENST00000492270 MIB1Q86YT6 1006 aa25.92■■□□□ 1.74
UPF3A-209ENST00000492270 SECISBP2LQ93073 1101 aaKnown RBP25.92■■□□□ 1.74
UPF3A-209ENST00000492270 POLR3BQ9NW08 1133 aaPredicted RBP25.92■■□□□ 1.74
UPF3A-209ENST00000492270 RASAL2Q9UJF2 1139 aa25.92■■□□□ 1.74
UPF3A-209ENST00000492270 DNMT3LQ9UJW3 386 aa25.92■■□□□ 1.74
UPF3A-209ENST00000492270 CNTN6Q9UQ52 1028 aa25.92■■□□□ 1.74
UPF3A-209ENST00000492270 PCDHGA2Q9Y5H1 932 aa25.92■■□□□ 1.74
UPF3A-209ENST00000492270 GOLGA6L22H0YM25 854 aa25.91■■□□□ 1.74
UPF3A-209ENST00000492270 PIK3R2O00459 728 aa25.91■■□□□ 1.74
UPF3A-209ENST00000492270 GABBR2O75899 941 aa25.91■■□□□ 1.74
UPF3A-209ENST00000492270 ADH1CP00326 375 aa25.91■■□□□ 1.74
UPF3A-209ENST00000492270 ADH5P11766 374 aa25.91■■□□□ 1.74
UPF3A-209ENST00000492270 EFEMP1Q12805 493 aa25.91■■□□□ 1.74
UPF3A-209ENST00000492270 MAN2A1Q16706 1144 aa25.91■■□□□ 1.74
UPF3A-209ENST00000492270 PMF1Q6P1K2 205 aa25.91■■□□□ 1.74
UPF3A-209ENST00000492270 HTR3DQ70Z44 454 aa25.91■■□□□ 1.74
UPF3A-209ENST00000492270 FAM114A1Q8IWE2 563 aa25.91■■□□□ 1.74
UPF3A-209ENST00000492270 ZNF276Q8N554 614 aa25.91■■□□□ 1.74
UPF3A-209ENST00000492270 OTUB2Q96DC9 234 aa25.91■■□□□ 1.74
UPF3A-209ENST00000492270 SAMSN1Q9NSI8 373 aaKnown RBP25.91■■□□□ 1.74
UPF3A-209ENST00000492270 AJAP1Q9UKB5 411 aaPredicted RBP25.91■■□□□ 1.74
UPF3A-209ENST00000492270 FRYLO94915 3013 aa25.9■■□□□ 1.74
UPF3A-209ENST00000492270 PAPSS2O95340 614 aaPredicted RBP25.9■■□□□ 1.74
UPF3A-209ENST00000492270 LCP1P13796 627 aa25.9■■□□□ 1.74
UPF3A-209ENST00000492270 PON1P27169 355 aa25.9■■□□□ 1.74
UPF3A-209ENST00000492270 PPP2R5DQ14738 602 aa25.9■■□□□ 1.74
UPF3A-209ENST00000492270 EXOC3L4Q17RC7 722 aa25.9■■□□□ 1.74
UPF3A-209ENST00000492270 MIIPQ5JXC2 388 aa25.9■■□□□ 1.74
UPF3A-209ENST00000492270 SFTPA1Q8IWL2 248 aa25.9■■□□□ 1.74
UPF3A-209ENST00000492270 SLC35F5Q8WV83 523 aa25.9■■□□□ 1.74
UPF3A-209ENST00000492270 ATRIPQ8WXE1 791 aa25.9■■□□□ 1.74
UPF3A-209ENST00000492270 KCTD13Q8WZ19 329 aa25.9■■□□□ 1.74
UPF3A-209ENST00000492270 EXOC4Q96A65 974 aa25.9■■□□□ 1.74
UPF3A-209ENST00000492270 ACP6Q9NPH0 428 aa25.9■■□□□ 1.74
UPF3A-209ENST00000492270 RIF1Q5UIP0 2472 aaKnown RBP25.89■■□□□ 1.74
UPF3A-209ENST00000492270 GTPBP10A4D1E9 387 aaKnown RBP25.89■■□□□ 1.74
UPF3A-209ENST00000492270 LILRB5O75023 590 aa25.89■■□□□ 1.74
UPF3A-209ENST00000492270 STC2O76061 302 aa25.89■■□□□ 1.74
UPF3A-209ENST00000492270 LMNAP02545 664 aaKnown RBP25.89■■□□□ 1.74
UPF3A-209ENST00000492270 PRKCSHP14314 528 aaPredicted RBP25.89■■□□□ 1.74
UPF3A-209ENST00000492270 GOLGA8FQ08AF8 430 aa25.89■■□□□ 1.74
UPF3A-209ENST00000492270 GOLGA8DPQ0D2H9 430 aa25.89■■□□□ 1.74
UPF3A-209ENST00000492270 STILQ15468 1287 aa25.89■■□□□ 1.74
UPF3A-209ENST00000492270 ARHGAP44Q17R89 818 aa25.89■■□□□ 1.74
UPF3A-209ENST00000492270 TADA2BQ86TJ2 420 aa25.89■■□□□ 1.74
UPF3A-209ENST00000492270 TMEM25Q86YD3 366 aa25.89■■□□□ 1.74
UPF3A-209ENST00000492270 SIX6OS1Q8N1H7 587 aa25.89■■□□□ 1.74
UPF3A-209ENST00000492270 ARHGAP18Q8N392 663 aa25.89■■□□□ 1.74
UPF3A-209ENST00000492270 RPLP0P6Q8NHW5 317 aa25.89■■□□□ 1.74
UPF3A-209ENST00000492270 TUBGCP2Q9BSJ2 902 aa25.89■■□□□ 1.74
UPF3A-209ENST00000492270 FAM126AQ9BYI3 521 aaPredicted RBP25.89■■□□□ 1.74
UPF3A-209ENST00000492270 SIX2Q9NPC8 291 aa25.89■■□□□ 1.74
UPF3A-209ENST00000492270 SPHK2Q9NRA0 654 aa25.89■■□□□ 1.74
UPF3A-209ENST00000492270 APEX2Q9UBZ4 518 aa25.89■■□□□ 1.74
UPF3A-209ENST00000492270 LSM7Q9UK45 103 aaKnown RBP25.89■■□□□ 1.74
UPF3A-209ENST00000492270 FAM186AA6NE01 2351 aa25.89■■□□□ 1.73
UPF3A-209ENST00000492270 YJEFN3A6XGL0 299 aa25.88■■□□□ 1.73
UPF3A-209ENST00000492270 BECN2A8MW95 431 aa25.88■■□□□ 1.73
UPF3A-209ENST00000492270 CHURC1-FNTBB4DL54 471 aa25.88■■□□□ 1.73
UPF3A-209ENST00000492270 KCNJ18B7U540 433 aa25.88■■□□□ 1.73
UPF3A-209ENST00000492270 E7ENQ6 273 aa25.88■■□□□ 1.73
UPF3A-209ENST00000492270 K7EQS6 105 aa25.88■■□□□ 1.73
UPF3A-209ENST00000492270 HMBSP08397 361 aa25.88■■□□□ 1.73
UPF3A-209ENST00000492270 FNTBP49356 437 aa25.88■■□□□ 1.73
UPF3A-209ENST00000492270 MFAP3P55082 362 aa25.88■■□□□ 1.73
UPF3A-209ENST00000492270 SEC13P55735 322 aa25.88■■□□□ 1.73
UPF3A-209ENST00000492270 KDSRQ06136 332 aa25.88■■□□□ 1.73
UPF3A-209ENST00000492270 KCNJ12Q14500 433 aa25.88■■□□□ 1.73
UPF3A-209ENST00000492270 FBXO43Q4G163 708 aa25.88■■□□□ 1.73
UPF3A-209ENST00000492270 HEATR6Q6AI08 1181 aaKnown RBP25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms