RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 SPHK2Q9NRA0 654 aa15.78■□□□□ 0.12
TOM1-215ENST00000491987 DNMT3LQ9UJW3 386 aa15.78■□□□□ 0.12
TOM1-215ENST00000491987 LSM7Q9UK45 103 aaKnown RBP15.78■□□□□ 0.12
TOM1-215ENST00000491987 PTPRZ1P23471 2315 aaPredicted RBP15.77■□□□□ 0.12
TOM1-215ENST00000491987 OTOGLQ3ZCN5 2332 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 HOXC11O43248 304 aaPredicted RBP15.77■□□□□ 0.12
TOM1-215ENST00000491987 GREM1O60565 184 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 KAT7O95251 611 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 APODP05090 189 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 RALAP11233 206 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 ID4P47928 161 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 PSEN1P49768 467 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 BCAT1P54687 386 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 PDE4CQ08493 712 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 CETN1Q12798 172 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 ANO4Q32M45 955 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 RAB41Q5JT25 222 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 BTBD8Q5XKL5 378 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 KLHDC10Q6PID8 442 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 TMEM25Q86YD3 366 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 MIB1Q86YT6 1006 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 TRIM59Q8IWR1 403 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 PPM1KQ8N3J5 372 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 CCDC33Q8N5R6 958 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 CCDC26Q8TAB7 109 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 SRRTQ9BXP5 876 aaKnown RBP15.77■□□□□ 0.12
TOM1-215ENST00000491987 UBXN6Q9BZV1 441 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 CLIC5Q9NZA1 410 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 KIAA1468Q9P260 1216 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 HESX1Q9UBX0 185 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 PCDHB4Q9Y5E5 795 aa15.77■□□□□ 0.12
TOM1-215ENST00000491987 GPR179Q6PRD1 2367 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 CCDC163A0A0D9SF12 145 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.76■□□□□ 0.11
TOM1-215ENST00000491987 XPO1O14980 1071 aaKnown RBP15.76■□□□□ 0.11
TOM1-215ENST00000491987 PMM2O15305 246 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 P4HA2O15460 535 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 RPP40O75818 363 aaKnown RBP15.76■□□□□ 0.11
TOM1-215ENST00000491987 GNA14O95837 355 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 CCDC192P0DO97 292 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 VDRP11473 427 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 PLA2G4AP47712 749 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 TKTL1P51854 596 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 BST2Q10589 180 aaKnown RBP15.76■□□□□ 0.11
TOM1-215ENST00000491987 KCNH2Q12809 1159 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 TMEM270Q6UE05 265 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 RRAGAQ7L523 313 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 TADA2BQ86TJ2 420 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 ARHGEF19Q8IW93 802 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 ETFBKMTQ8IXQ9 262 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 LMO3Q8TAP4 145 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 UBA3Q8TBC4 463 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 GAB3Q8WWW8 586 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 ULBP1Q9BZM6 244 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 PARD6AQ9NPB6 346 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 ZDHHC4Q9NPG8 344 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 RASAL2Q9UJF2 1139 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 USP18Q9UMW8 372 aa15.76■□□□□ 0.11
TOM1-215ENST00000491987 EP300Q09472 2414 aaPredicted RBP15.75■□□□□ 0.11
TOM1-215ENST00000491987 O00370 1275 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 AXIN1O15169 862 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 TULP3O75386 442 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 APBB3O95704 486 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 AFPP02771 609 aaKnown RBP15.75■□□□□ 0.11
TOM1-215ENST00000491987 RETP07949 1114 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 HMBSP08397 361 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 TIE1P35590 1138 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 GRIA2P42262 883 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 MARSP56192 900 aaKnown RBP15.75■□□□□ 0.11
TOM1-215ENST00000491987 YWHAGP61981 247 aaKnown RBP eCLIP15.75■□□□□ 0.11
TOM1-215ENST00000491987 MRPS21P82921 87 aaKnown RBP15.75■□□□□ 0.11
TOM1-215ENST00000491987 SPEM2Q0P670 501 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 EFEMP1Q12805 493 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 TPGS1Q6ZTW0 290 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 ARHGAP18Q8N392 663 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 ZNF276Q8N554 614 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 FAM160A2Q8N612 972 aaPredicted RBP15.75■□□□□ 0.11
TOM1-215ENST00000491987 ALLCQ8N6M5 410 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 GPR161Q8N6U8 529 aaKnown RBP15.75■□□□□ 0.11
TOM1-215ENST00000491987 EHBP1Q8NDI1 1231 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 TSTD1Q8NFU3 115 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 NDRG1Q92597 394 aaKnown RBP15.75■□□□□ 0.11
TOM1-215ENST00000491987 RMDN1Q96DB5 314 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 CDK5RAP1Q96SZ6 601 aaKnown RBP15.75■□□□□ 0.11
TOM1-215ENST00000491987 LRRC4Q9HBW1 653 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 MMP17Q9ULZ9 603 aa15.75■□□□□ 0.11
TOM1-215ENST00000491987 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.75■□□□□ 0.11
TOM1-215ENST00000491987 ZNF292O60281 2723 aa15.74■□□□□ 0.11
TOM1-215ENST00000491987 ATG2BQ96BY7 2078 aa15.74■□□□□ 0.11
TOM1-215ENST00000491987 NEDD8-MDP1E9PL57 170 aa15.74■□□□□ 0.11
TOM1-215ENST00000491987 RNF225M0QZC1 329 aaPredicted RBP15.74■□□□□ 0.11
TOM1-215ENST00000491987 TRIM24O15164 1050 aa15.74■□□□□ 0.11
TOM1-215ENST00000491987 STC2O76061 302 aa15.74■□□□□ 0.11
TOM1-215ENST00000491987 KLF8O95600 359 aaPredicted RBP15.74■□□□□ 0.11
TOM1-215ENST00000491987 ZBED1O96006 694 aa15.74■□□□□ 0.11
TOM1-215ENST00000491987 CALCAP01258 141 aa15.74■□□□□ 0.11
TOM1-215ENST00000491987 PAEPP09466 180 aa15.74■□□□□ 0.11
TOM1-215ENST00000491987 SETSIPP0DME0 302 aa15.74■□□□□ 0.11
TOM1-215ENST00000491987 TGM1P22735 817 aa15.74■□□□□ 0.11
TOM1-215ENST00000491987 BRD2P25440 801 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms