RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 GRIK2Q13002 908 aa15.32■□□□□ 0.04
SSR4-212ENST00000491833 SNRNP35Q16560 246 aaKnown RBP15.32■□□□□ 0.04
SSR4-212ENST00000491833 COL28A1Q2UY09 1125 aa15.32■□□□□ 0.04
SSR4-212ENST00000491833 PNPLA1Q8N8W4 532 aa15.32■□□□□ 0.04
SSR4-212ENST00000491833 ERLEC1Q96DZ1 483 aa15.32■□□□□ 0.04
SSR4-212ENST00000491833 ZNF419Q96HQ0 510 aaPredicted RBP15.32■□□□□ 0.04
SSR4-212ENST00000491833 CLIC6Q96NY7 704 aa15.32■□□□□ 0.04
SSR4-212ENST00000491833 ACOX2Q99424 681 aa15.32■□□□□ 0.04
SSR4-212ENST00000491833 GABRG3Q99928 467 aa15.32■□□□□ 0.04
SSR4-212ENST00000491833 MED10Q9BTT4 135 aa15.32■□□□□ 0.04
SSR4-212ENST00000491833 ZDHHC5Q9C0B5 715 aa15.32■□□□□ 0.04
SSR4-212ENST00000491833 CD248Q9HCU0 757 aa15.32■□□□□ 0.04
SSR4-212ENST00000491833 DMAP1Q9NPF5 467 aaPredicted RBP15.32■□□□□ 0.04
SSR4-212ENST00000491833 GMIPQ9P107 970 aa15.32■□□□□ 0.04
SSR4-212ENST00000491833 SRPRBQ9Y5M8 271 aaKnown RBP15.32■□□□□ 0.04
SSR4-212ENST00000491833 CLIC4Q9Y696 253 aa15.32■□□□□ 0.04
SSR4-212ENST00000491833 FREM2Q5SZK8 3169 aa15.32■□□□□ 0.04
SSR4-212ENST00000491833 MEI4A8MW99 385 aa15.31■□□□□ 0.04
SSR4-212ENST00000491833 CACNG3O60359 315 aa15.31■□□□□ 0.04
SSR4-212ENST00000491833 CLSTN1O94985 981 aa15.31■□□□□ 0.04
SSR4-212ENST00000491833 CST3P01034 146 aaPredicted RBP15.31■□□□□ 0.04
SSR4-212ENST00000491833 TRPC3Q13507 836 aa15.31■□□□□ 0.04
SSR4-212ENST00000491833 SOWAHCQ53LP3 525 aaPredicted RBP15.31■□□□□ 0.04
SSR4-212ENST00000491833 KIAA1324Q6UXG2 1013 aaKnown RBP15.31■□□□□ 0.04
SSR4-212ENST00000491833 CCNI2Q6ZMN8 369 aaPredicted RBP15.31■□□□□ 0.04
SSR4-212ENST00000491833 SCAMP5Q8TAC9 235 aa15.31■□□□□ 0.04
SSR4-212ENST00000491833 SMARCD1Q96GM5 515 aa15.31■□□□□ 0.04
SSR4-212ENST00000491833 KCNK16Q96T55 309 aa15.31■□□□□ 0.04
SSR4-212ENST00000491833 BBS2Q9BXC9 721 aa15.31■□□□□ 0.04
SSR4-212ENST00000491833 CD93Q9NPY3 652 aa15.31■□□□□ 0.04
SSR4-212ENST00000491833 COMMD8Q9NX08 183 aa15.31■□□□□ 0.04
SSR4-212ENST00000491833 CHORDC1Q9UHD1 332 aaPredicted RBP15.31■□□□□ 0.04
SSR4-212ENST00000491833 LSM7Q9UK45 103 aaKnown RBP15.31■□□□□ 0.04
SSR4-212ENST00000491833 RAD54BQ9Y620 910 aa15.31■□□□□ 0.04
SSR4-212ENST00000491833 GFRA2O00451 464 aa15.3■□□□□ 0.04
SSR4-212ENST00000491833 TLR5O60602 858 aa15.3■□□□□ 0.04
SSR4-212ENST00000491833 STAU1O95793 577 aaKnown RBP15.3■□□□□ 0.04
SSR4-212ENST00000491833 ZDHHC11BP0C7U3 371 aa15.3■□□□□ 0.04
SSR4-212ENST00000491833 TYRP14679 529 aa15.3■□□□□ 0.04
SSR4-212ENST00000491833 GOLGA8FQ08AF8 430 aa15.3■□□□□ 0.04
SSR4-212ENST00000491833 GOLGA8DPQ0D2H9 430 aa15.3■□□□□ 0.04
SSR4-212ENST00000491833 PSMD6Q15008 389 aa15.3■□□□□ 0.04
SSR4-212ENST00000491833 GLIS3Q8NEA6 775 aa15.3■□□□□ 0.04
SSR4-212ENST00000491833 MDM1Q8TC05 714 aa15.3■□□□□ 0.04
SSR4-212ENST00000491833 WBP2Q969T9 261 aa15.3■□□□□ 0.04
SSR4-212ENST00000491833 SYAP1Q96A49 352 aaPredicted RBP15.3■□□□□ 0.04
SSR4-212ENST00000491833 TNIP3Q96KP6 325 aa15.3■□□□□ 0.04
SSR4-212ENST00000491833 MRGPRX1Q96LB2 322 aa15.3■□□□□ 0.04
SSR4-212ENST00000491833 SLC6A17Q9H1V8 727 aa15.3■□□□□ 0.04
SSR4-212ENST00000491833 KRT82Q9NSB4 513 aa15.3■□□□□ 0.04
SSR4-212ENST00000491833 CACNA2D2Q9NY47 1150 aa15.3■□□□□ 0.04
SSR4-212ENST00000491833 MARK1Q9P0L2 795 aa15.3■□□□□ 0.04
SSR4-212ENST00000491833 NXF1Q9UBU9 619 aaKnown RBP15.3■□□□□ 0.04
SSR4-212ENST00000491833 A0A1B0GTW7 788 aa15.29■□□□□ 0.04
SSR4-212ENST00000491833 FAM92AA1XBS5 289 aa15.29■□□□□ 0.04
SSR4-212ENST00000491833 PRRT4C9JH25 899 aa15.29■□□□□ 0.04
SSR4-212ENST00000491833 EIF3DO15371 548 aaKnown RBP eCLIP15.29■□□□□ 0.04
SSR4-212ENST00000491833 CD6P30203 668 aa15.29■□□□□ 0.04
SSR4-212ENST00000491833 ATICP31939 592 aa15.29■□□□□ 0.04
SSR4-212ENST00000491833 DGKGP49619 791 aa15.29■□□□□ 0.04
SSR4-212ENST00000491833 CYP24A1Q07973 514 aa15.29■□□□□ 0.04
SSR4-212ENST00000491833 STARD3Q14849 445 aa15.29■□□□□ 0.04
SSR4-212ENST00000491833 TPGS1Q6ZTW0 290 aa15.29■□□□□ 0.04
SSR4-212ENST00000491833 TOGARAM2Q6ZUX3 1019 aa15.29■□□□□ 0.04
SSR4-212ENST00000491833 HTR3DQ70Z44 454 aa15.29■□□□□ 0.04
SSR4-212ENST00000491833 GLRX5Q86SX6 157 aa15.29■□□□□ 0.04
SSR4-212ENST00000491833 ZCCHC9Q8N567 271 aaKnown RBP15.29■□□□□ 0.04
SSR4-212ENST00000491833 RDH13Q8NBN7 331 aa15.29■□□□□ 0.04
SSR4-212ENST00000491833 CCDC127Q96BQ5 260 aa15.29■□□□□ 0.04
SSR4-212ENST00000491833 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.29■□□□□ 0.04
SSR4-212ENST00000491833 IL37Q9NZH6 218 aa15.29■□□□□ 0.04
SSR4-212ENST00000491833 WDR35Q9P2L0 1181 aa15.29■□□□□ 0.04
SSR4-212ENST00000491833 PCOLCE2Q9UKZ9 415 aa15.29■□□□□ 0.04
SSR4-212ENST00000491833 NFE2L3Q9Y4A8 694 aa15.29■□□□□ 0.04
SSR4-212ENST00000491833 DSPP15924 2871 aaKnown RBP15.29■□□□□ 0.04
SSR4-212ENST00000491833 ANKRD11Q6UB99 2663 aaPredicted RBP15.29■□□□□ 0.04
SSR4-212ENST00000491833 PLXNB3Q9ULL4 1909 aa15.28■□□□□ 0.04
SSR4-212ENST00000491833 A0A087X0B3 334 aa15.28■□□□□ 0.04
SSR4-212ENST00000491833 CBFA2T3O75081 653 aa15.28■□□□□ 0.04
SSR4-212ENST00000491833 AP1G2O75843 785 aa15.28■□□□□ 0.04
SSR4-212ENST00000491833 CER1O95813 267 aa15.28■□□□□ 0.04
SSR4-212ENST00000491833 MAOBP27338 520 aa15.28■□□□□ 0.04
SSR4-212ENST00000491833 CYP2J2P51589 502 aa15.28■□□□□ 0.04
SSR4-212ENST00000491833 MYL6P60660 151 aa15.28■□□□□ 0.04
SSR4-212ENST00000491833 HPS3Q969F9 1004 aa15.28■□□□□ 0.04
SSR4-212ENST00000491833 LRRC27Q9C0I9 530 aa15.28■□□□□ 0.04
SSR4-212ENST00000491833 XYLT2Q9H1B5 865 aa15.28■□□□□ 0.04
SSR4-212ENST00000491833 TNMDQ9H2S6 317 aa15.28■□□□□ 0.04
SSR4-212ENST00000491833 FBXO44Q9H4M3 255 aa15.28■□□□□ 0.04
SSR4-212ENST00000491833 SMYD3Q9H7B4 428 aa15.28■□□□□ 0.04
SSR4-212ENST00000491833 TLR8Q9NR97 1041 aaKnown RBP15.28■□□□□ 0.04
SSR4-212ENST00000491833 AGPAT3Q9NRZ7 376 aa15.28■□□□□ 0.04
SSR4-212ENST00000491833 SMG1Q96Q15 3661 aaKnown RBP15.28■□□□□ 0.04
SSR4-212ENST00000491833 UBE4BO95155 1302 aa15.27■□□□□ 0.04
SSR4-212ENST00000491833 GREM1O60565 184 aa15.27■□□□□ 0.04
SSR4-212ENST00000491833 PHACTR2O75167 634 aa15.27■□□□□ 0.04
SSR4-212ENST00000491833 ZNF883P0CG24 379 aa15.27■□□□□ 0.04
SSR4-212ENST00000491833 NCAM1P13591 858 aa15.27■□□□□ 0.04
SSR4-212ENST00000491833 CEBPZQ03701 1054 aaKnown RBP15.27■□□□□ 0.04
SSR4-212ENST00000491833 ZNF699Q32M78 642 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms