RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 VDRP11473 427 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 BDNFP23560 247 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 ATXN1P54253 815 aaKnown RBP15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 JAM2P57087 298 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 SPEM2Q0P670 501 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 MTF1Q14872 753 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 PDGFRLQ15198 375 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 STILQ15468 1287 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 MEA1Q16626 185 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 ARHGAP44Q17R89 818 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 NAIF1Q69YI7 327 aaPredicted RBP15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 HEATR6Q6AI08 1181 aaKnown RBP15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 WDR5BQ86VZ2 330 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 GAS2L3Q86XJ1 694 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 FAM71AQ8IYT1 594 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 SPATA17Q96L03 361 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 C8orf48Q96LL4 319 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 HEXIM2Q96MH2 286 aaKnown RBP15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 RBSNQ9H1K0 784 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 FBRSL1Q9HCM7 1045 aaKnown RBP15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 PNPLA8Q9NP80 782 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 DMAP1Q9NPF5 467 aaPredicted RBP15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 KRT82Q9NSB4 513 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 IFNKQ9P0W0 207 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 GREB1Q4ZG55 1949 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 OBSL1O75147 1896 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 C2orf78A6NCI8 922 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 O00370 1275 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 CLDN5O00501 218 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 CBFA2T2O43439 604 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 LRP3O75074 770 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 FAM200BP0CF97 657 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 KRT5P13647 590 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 TCF3P15923 654 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 SDHBP21912 280 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 POLR2FP61218 127 aaKnown RBP15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 GRSF1Q12849 480 aaKnown RBP eCLIP15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 RAPGEF1Q13905 1077 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 DRAP1Q14919 205 aaPredicted RBP15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 SGO2Q562F6 1265 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 FIGNQ5HY92 759 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 PPP1R26Q5T8A7 1209 aaPredicted RBP15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 SCN4BQ8IWT1 228 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 OSCP1Q8WVF1 389 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 EZH1Q92800 747 aaPredicted RBP15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 IQCDQ96DY2 449 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 PCMTD1Q96MG8 357 aaPredicted RBP15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 CYP2S1Q96SQ9 504 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 MED10Q9BTT4 135 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 TTYH3Q9C0H2 523 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 TMEM30AQ9NV96 361 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 ITIH6Q6UXX5 1313 aa15.83■□□□□ 0.12
CDC42SE1-205ENST00000491825 TRAV19A0A0A6YYK7 116 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 CCDC163A0A0D9SF12 145 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 FOXN3O00409 490 aaPredicted RBP15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 AP1G2O75843 785 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 EGFP01133 1207 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 CKMP06732 381 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 USP17L7P0C7H9 530 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 CD19P15391 556 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 GJA4P35212 333 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 GRIK1P39086 918 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 CACNA2D1P54289 1103 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 USP46P62068 366 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 CC2D1AQ6P1N0 951 aaPredicted RBP15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 LCLAT1Q6UWP7 414 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 CLEC20AQ6ZU45 233 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 ARL14EPQ8N8R7 260 aaPredicted RBP15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 TTLL2Q9BWV7 592 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 EDEM3Q9BZQ6 932 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 XPO4Q9C0E2 1151 aaKnown RBP15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 ECT2Q9H8V3 914 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 TRPC7Q9HCX4 862 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 SEMA4GQ9NTN9 838 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 TSPAN16Q9UKR8 245 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 CDV3Q9UKY7 258 aaKnown RBP15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 MYO6Q9UM54 1294 aa15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.82■□□□□ 0.12
CDC42SE1-205ENST00000491825 F8VP50 259 aa15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 RNF40O75150 1001 aa15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 ANXA13P27216 316 aa15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 ADORA2BP29275 332 aa15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 GNA15P30679 374 aa15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 GALK1P51570 392 aa15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 BCAT1P54687 386 aa15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 ZXDBP98169 803 aa15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 CNGA2Q16280 664 aa15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 EML3Q32P44 896 aa15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 PKDCCQ504Y2 493 aa15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 DENND4CQ5VZ89 1909 aa15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 FMNL3Q8IVF7 1028 aa15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 CPA6Q8N4T0 437 aa15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 FAM160A2Q8N612 972 aaPredicted RBP15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 ANKRD52Q8NB46 1076 aa15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 ZMIZ2Q8NF64 920 aa15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 SH3RF2Q8TEC5 729 aa15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 TFAP2BQ92481 460 aa15.81■□□□□ 0.12
CDC42SE1-205ENST00000491825 SMOQ99835 787 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms