RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 TBC1D22BQ9NU19 505 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 ARHGEF38Q9NXL2 777 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 PAIP2BQ9ULR5 123 aaKnown RBP10.17□□□□□ -0.78
ERCC3-208ENST00000491292 PCDHA10Q9Y5I2 948 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 NUP98P52948 1817 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 IGKV6D-41A0A0C4DH26 115 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 GLRBP48167 497 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 CCR3P51677 355 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 DGKZQ13574 1117 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 TFDP2Q14188 446 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 MYBPC2Q14324 1141 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 TRMT10BQ6PF06 316 aaKnown RBP10.17□□□□□ -0.78
ERCC3-208ENST00000491292 TDRPQ86YL5 185 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 UNC5BQ8IZJ1 945 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 MCUQ8NE86 351 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 DDX1Q92499 740 aaKnown RBP10.17□□□□□ -0.78
ERCC3-208ENST00000491292 FAM149B1Q96BN6 582 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 DGCR14Q96DF8 476 aaKnown RBP10.17□□□□□ -0.78
ERCC3-208ENST00000491292 NLRP4Q96MN2 994 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 CISHQ9NSE2 258 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 STRIP2Q9ULQ0 834 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 AURKCQ9UQB9 309 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 CACNA1SQ13698 1873 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 DCCP43146 1447 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 ATP9BO43861 1147 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 ZNF862O60290 1169 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 GPC4O75487 556 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 CYP1A1P04798 512 aaPredicted RBP10.17□□□□□ -0.78
ERCC3-208ENST00000491292 ARL1P40616 181 aaPredicted RBP10.17□□□□□ -0.78
ERCC3-208ENST00000491292 RGS2P41220 211 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 IGBP1P78318 339 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 PHEXP78562 749 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 KRT72Q14CN4 511 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 ANKRD20A4Q4UJ75 823 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 CYP2R1Q6VVX0 501 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 ACAD11Q709F0 780 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 LPCAT2Q7L5N7 544 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 SNX32Q86XE0 403 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 TMC2Q8TDI7 906 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 CNKSR2Q8WXI2 1034 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 SKA1Q96BD8 255 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 HSPBAP1Q96EW2 488 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 MBOAT7Q96N66 472 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 CATSPER2Q96P56 530 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 SNX13Q9Y5W8 968 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 AP4B1Q9Y6B7 739 aa10.17□□□□□ -0.78
ERCC3-208ENST00000491292 CNTNAP2Q9UHC6 1331 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 TRAFD1O14545 582 aaPredicted RBP10.16□□□□□ -0.78
ERCC3-208ENST00000491292 EXTL3O43909 919 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 MAGEC1O60732 1142 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 ZNF189O75820 626 aaPredicted RBP10.16□□□□□ -0.78
ERCC3-208ENST00000491292 KDELR1P24390 212 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 MIPP30301 263 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 ETFBP38117 255 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 RPL5P46777 297 aaKnown RBP10.16□□□□□ -0.78
ERCC3-208ENST00000491292 TPD52P55327 224 aaPredicted RBP10.16□□□□□ -0.78
ERCC3-208ENST00000491292 OGDHQ02218 1023 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 C1QBPQ07021 282 aaKnown RBP10.16□□□□□ -0.78
ERCC3-208ENST00000491292 KLF1Q13351 362 aaPredicted RBP10.16□□□□□ -0.78
ERCC3-208ENST00000491292 ATP1A4Q13733 1029 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 C15orf59Q2T9L4 293 aaPredicted RBP10.16□□□□□ -0.78
ERCC3-208ENST00000491292 KLC3Q6P597 504 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 MCF2L2Q86YR7 1114 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 OLIG1Q8TAK6 271 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 PIWIL2Q8TC59 973 aaKnown RBP10.16□□□□□ -0.78
ERCC3-208ENST00000491292 IL1RL2Q9HB29 575 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 XPNPEP1Q9NQW7 623 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 FAM49BQ9NUQ9 324 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 THAP1Q9NVV9 213 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 EPS15L1Q9UBC2 864 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 ADAMTS6Q9UKP5 1117 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 HBS1LQ9Y450 684 aaKnown RBP10.16□□□□□ -0.78
ERCC3-208ENST00000491292 ITM2AO43736 263 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 CDKN2BP42772 138 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 SERPINB8P50452 374 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 GTF2A2P52657 109 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 JAG1P78504 1218 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 NADK2Q4G0N4 442 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.16□□□□□ -0.78
ERCC3-208ENST00000491292 ZNF516Q92618 1163 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 PRMT6Q96LA8 375 aaPredicted RBP10.16□□□□□ -0.78
ERCC3-208ENST00000491292 FAM210AQ96ND0 272 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 PAIP1Q9H074 479 aaKnown RBP10.16□□□□□ -0.78
ERCC3-208ENST00000491292 APOBEC3GQ9HC16 384 aaKnown RBP10.16□□□□□ -0.78
ERCC3-208ENST00000491292 BCAP29Q9UHQ4 241 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 PLLPQ9Y342 182 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 RNF103-CHMP3A0A140T963 221 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 TMEM191CA6NGB0 347 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 GOLGA8TH3BQL2 631 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 FOXD2O60548 495 aaPredicted RBP10.16□□□□□ -0.78
ERCC3-208ENST00000491292 ITGAVP06756 1048 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 FAM58BPP0C7Q3 252 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 RALBP11234 206 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 FSTL1Q12841 308 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 CTC1Q2NKJ3 1217 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 PPM1JQ5JR12 505 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 ITPRIPL1Q6GPH6 555 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 DENND1BQ6P3S1 775 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 SESTD1Q86VW0 696 aa10.16□□□□□ -0.78
ERCC3-208ENST00000491292 RNF135Q8IUD6 432 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms