RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 ERMP1Q7Z2K6 904 aa18.96■□□□□ 0.63
HMGN1-219ENST00000491183 KBTBD6Q86V97 674 aa18.96■□□□□ 0.63
HMGN1-219ENST00000491183 ETFBKMTQ8IXQ9 262 aa18.96■□□□□ 0.63
HMGN1-219ENST00000491183 CCDC33Q8N5R6 958 aa18.96■□□□□ 0.63
HMGN1-219ENST00000491183 NAT16Q8N8M0 369 aa18.96■□□□□ 0.63
HMGN1-219ENST00000491183 CCDC26Q8TAB7 109 aa18.96■□□□□ 0.63
HMGN1-219ENST00000491183 CEP63Q96MT8 703 aa18.96■□□□□ 0.63
HMGN1-219ENST00000491183 UBXN6Q9BZV1 441 aa18.96■□□□□ 0.63
HMGN1-219ENST00000491183 METTL14Q9HCE5 456 aaKnown RBP18.96■□□□□ 0.63
HMGN1-219ENST00000491183 HOXC11O43248 304 aaPredicted RBP18.95■□□□□ 0.62
HMGN1-219ENST00000491183 APBB3O95704 486 aa18.95■□□□□ 0.62
HMGN1-219ENST00000491183 APODP05090 189 aa18.95■□□□□ 0.62
HMGN1-219ENST00000491183 PPP1R2P41236 205 aa18.95■□□□□ 0.62
HMGN1-219ENST00000491183 KIR2DL1P43626 348 aaPredicted RBP18.95■□□□□ 0.62
HMGN1-219ENST00000491183 FMO5P49326 533 aa18.95■□□□□ 0.62
HMGN1-219ENST00000491183 MRPS21P82921 87 aaKnown RBP18.95■□□□□ 0.62
HMGN1-219ENST00000491183 PUM1Q14671 1186 aaKnown RBP eCLIP18.95■□□□□ 0.622e-6■□□□□ 10.8
HMGN1-219ENST00000491183 RAB41Q5JT25 222 aa18.95■□□□□ 0.62
HMGN1-219ENST00000491183 PIGZQ86VD9 579 aa18.95■□□□□ 0.62
HMGN1-219ENST00000491183 TTC30AQ86WT1 665 aa18.95■□□□□ 0.62
HMGN1-219ENST00000491183 ZNF276Q8N554 614 aa18.95■□□□□ 0.62
HMGN1-219ENST00000491183 UBR7Q8N806 425 aa18.95■□□□□ 0.62
HMGN1-219ENST00000491183 ANKRD52Q8NB46 1076 aa18.95■□□□□ 0.62
HMGN1-219ENST00000491183 ARHGEF4Q9NR80 690 aa18.95■□□□□ 0.62
HMGN1-219ENST00000491183 EBF1Q9UH73 591 aa18.95■□□□□ 0.62
HMGN1-219ENST00000491183 NAGPAQ9UK23 515 aa18.95■□□□□ 0.62
HMGN1-219ENST00000491183 MMP17Q9ULZ9 603 aa18.95■□□□□ 0.62
HMGN1-219ENST00000491183 SPAG17Q6Q759 2223 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 SDK1Q7Z5N4 2213 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 CEP250Q9BV73 2442 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 TULP2O00295 520 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 BIN1O00499 593 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 LRP3O75074 770 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 TULP3O75386 442 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 CCDC192P0DO97 292 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 HNRNPLP14866 589 aaKnown RBP eCLIP18.94■□□□□ 0.62
HMGN1-219ENST00000491183 GRIA2P42262 883 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 PLA2G4AP47712 749 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 PSEN1P49768 467 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 LMNB2Q03252 620 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 KDSRQ06136 332 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 C10orf120Q5SQS8 335 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 CACNA2D4Q7Z3S7 1137 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 IL17RCQ8NAC3 791 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 NELFBQ8WX92 580 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 SEMA4GQ9NTN9 838 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 CLIC5Q9NZA1 410 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 DNMT3LQ9UJW3 386 aa18.94■□□□□ 0.62
HMGN1-219ENST00000491183 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.94■□□□□ 0.62
HMGN1-219ENST00000491183 MYO18AQ92614 2054 aaKnown RBP18.93■□□□□ 0.62
HMGN1-219ENST00000491183 PRR5-ARHGAP8B1AHC4 643 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.93■□□□□ 0.62
HMGN1-219ENST00000491183 DCLK1O15075 740 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 TRIM24O15164 1050 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 PMM2O15305 246 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 TIE1P35590 1138 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 TNFRSF4P43489 277 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 ARHGAP8P85298 464 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 CRY1Q16526 586 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 CSRP2Q16527 193 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 ANO4Q32M45 955 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 CCDC40Q4G0X9 1142 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 BTBD8Q5XKL5 378 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 FOXR2Q6PJQ5 311 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 TMEM92Q6UXU6 159 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 Q6ZNB5 142 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 RASSF3Q86WH2 238 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 ALLCQ8N6M5 410 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 TXNDC5Q8NBS9 432 aaKnown RBP18.93■□□□□ 0.62
HMGN1-219ENST00000491183 LMO3Q8TAP4 145 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 ZC3H10Q96K80 434 aaKnown RBP18.93■□□□□ 0.62
HMGN1-219ENST00000491183 ZDHHC4Q9NPG8 344 aa18.93■□□□□ 0.62
HMGN1-219ENST00000491183 CIZ1Q9ULV3 898 aaPredicted RBP18.93■□□□□ 0.62
HMGN1-219ENST00000491183 SGK1O00141 431 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 STC2O76061 302 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 KLF8O95600 359 aaPredicted RBP18.92■□□□□ 0.62
HMGN1-219ENST00000491183 KLKB1P03952 638 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 RALAP11233 206 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 DGKEP52429 567 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 STX17P56962 302 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 FOXK2Q01167 660 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 PDE4CQ08493 712 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 GOLGA7BQ2TAP0 167 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 PM20D1Q6GTS8 502 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 DGLUCYQ7Z3D6 616 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 TSTD1Q8NFU3 115 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 NDRG1Q92597 394 aaKnown RBP18.92■□□□□ 0.62
HMGN1-219ENST00000491183 LOXL4Q96JB6 756 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 ARRDC1-AS1Q9H2J1 176 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 DEC1Q9P2X7 70 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 LSM7Q9UK45 103 aaKnown RBP18.92■□□□□ 0.62
HMGN1-219ENST00000491183 TSPAN16Q9UKR8 245 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 HCN2Q9UL51 889 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 CTNND2Q9UQB3 1225 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 INVSQ9Y283 1065 aa18.92■□□□□ 0.62
HMGN1-219ENST00000491183 TBC1D3BA6NDS4 549 aa18.91■□□□□ 0.62
HMGN1-219ENST00000491183 RNF225M0QZC1 329 aaPredicted RBP18.91■□□□□ 0.62
HMGN1-219ENST00000491183 VDRP11473 427 aa18.91■□□□□ 0.62
HMGN1-219ENST00000491183 TBXAS1P24557 533 aaPredicted RBP18.91■□□□□ 0.62
HMGN1-219ENST00000491183 TKTL1P51854 596 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms