RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 PDZD8Q8NEN9 1154 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 OVCA2Q8WZ82 227 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 IRGQQ8WZA9 623 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 FGF13Q92913 245 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 KHSRPQ92945 711 aaKnown RBP eCLIP11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 CYP2S1Q96SQ9 504 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 DESI2Q9BSY9 194 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 SELENOOQ9BVL4 669 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 SLC46A2Q9BY10 475 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 THAP2Q9H0W7 228 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 KCNF1Q9H3M0 494 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 SLITRK6Q9H5Y7 841 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 AVENQ9NQS1 362 aaPredicted RBP11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 THEGQ9P2T0 379 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 NAALADL1Q9UQQ1 740 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 REXO2Q9Y3B8 237 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 TCF20Q9UGU0 1960 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 EIF3CLB5ME19 914 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 ZNF197O14709 1029 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 COCHO43405 550 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 TLR5O60602 858 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 DAB1O75553 588 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 FGF19O95750 216 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 OAS1P00973 400 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 MBL2P11226 248 aaPredicted RBP11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 RALAP11233 206 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 FLT3P36888 993 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 MAGEA1P43355 309 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 GSCP56915 257 aaPredicted RBP11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 SNX16P57768 344 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 PITX1P78337 314 aaPredicted RBP11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 EFEMP1Q12805 493 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 ZNF268Q14587 947 aaPredicted RBP11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 HECTD3Q5T447 861 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 SYPL2Q5VXT5 272 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 DNAJC24Q6P3W2 148 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 TOGARAM2Q6ZUX3 1019 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 SLC26A9Q7LBE3 791 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 CCDC170Q8IYT3 715 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 DEFB106AQ8N104 65 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 ARHGAP18Q8N392 663 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 ARL14EPQ8N8R7 260 aaPredicted RBP11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 C3orf20Q8ND61 904 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 NECTIN4Q96NY8 510 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 MCEEQ96PE7 176 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 PPP1R9BQ96SB3 815 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 EIF3CQ99613 913 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 RNF38Q9H0F5 515 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 TASP1Q9H6P5 420 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 SMPD4Q9NXE4 827 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 SFMBT1Q9UHJ3 866 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 RASAL2Q9UJF2 1139 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 STRIP2Q9ULQ0 834 aa11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 EPN1Q9Y6I3 576 aaPredicted RBP11.27□□□□□ -0.61
CACNA1C-227ENST00000491104 COL6A3P12111 3177 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 SYNJ2BP-COX16A0A087WUM0 186 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 A0A0U1RQJ8 604 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 C2CD4DB7Z1M9 353 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 SART1O43290 800 aaKnown RBP11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 MSI1O43347 362 aaKnown RBP11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 HSF2BPO75031 334 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 LCA5LO95447 670 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 PRAMEF12O95522 483 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 H2AFZP0C0S5 128 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 NCAM1P13591 858 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 TFE3P19532 575 aaPredicted RBP11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 PPP3CCP48454 512 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 RPL7AP62424 266 aaKnown RBP11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 YWHAZP63104 245 aaKnown RBP11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 SPA17Q15506 151 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 SMAD2Q15796 467 aaKnown RBP11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 EFHC1Q5JVL4 640 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 C10orf120Q5SQS8 335 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 SNX30Q5VWJ9 437 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 PLEKHA7Q6IQ23 1121 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 PPP1R2P3Q6NXS1 205 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 H2AFVQ71UI9 128 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 RSRC2Q7L4I2 434 aaKnown RBP11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 TAC4Q86UU9 113 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 ZDHHC17Q8IUH5 632 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 TTC16Q8NEE8 873 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 ZSCAN18Q8TBC5 510 aaPredicted RBP11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 ADAM32Q8TC27 787 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 RNF139Q8WU17 664 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 ATRIPQ8WXE1 791 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 GOLGA1Q92805 767 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 VCPIP1Q96JH7 1222 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 SLC2A13Q96QE2 648 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 ADAM33Q9BZ11 813 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 TRIM7Q9C029 511 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 NACA2Q9H009 215 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 POPDC2Q9HBU9 364 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 ABCC13Q9NSE7 274 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 ASNSD1Q9NWL6 643 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 CLIC5Q9NZA1 410 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 COX16Q9P0S2 106 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 WDR35Q9P2L0 1181 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 TMEM59LQ9UK28 342 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 CDH7Q9ULB5 785 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms