RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 SP110Q9HB58 689 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 POPDC2Q9HBU9 364 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 GIT1Q9Y2X7 761 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 IGKV6-21A0A0C4DH24 114 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 A0A0G2JND7 137 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 DFFAO00273 331 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 CCDC22O60826 627 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 HAUS5O94927 633 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 STAU1O95793 577 aaKnown RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 CALRP27797 417 aaKnown RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 SPRP35270 261 aaPredicted RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 PAPOLAP51003 745 aaKnown RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 SESN2P58004 480 aaPredicted RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 AUHQ13825 339 aaKnown RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 TRADDQ15628 312 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 MFSD5Q6N075 450 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 LVRNQ6Q4G3 990 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 SDCCAG8Q86SQ7 713 aaPredicted RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 MAML1Q92585 1016 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 COLEC11Q9BWP8 271 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 TSSK1BQ9BXA7 367 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 BCO2Q9BYV7 579 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 XPNPEP3Q9NQH7 507 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 CDH9Q9ULB4 789 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 XPO1O14980 1071 aaKnown RBP7.61□□□□□ -1.19
NPHP3-208ENST00000490993 ANXA9O76027 345 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 GSTA1P08263 222 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 FAM163BP0C2L3 166 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 GHRP10912 638 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 KRT4P19013 534 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 ELF1P32519 619 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 ARL1P40616 181 aaPredicted RBP7.61□□□□□ -1.19
NPHP3-208ENST00000490993 CDK16Q00536 496 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 ADIGQ0VDE8 80 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 XRCC4Q13426 336 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 NAB1Q13506 487 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 GRB14Q14449 540 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 DCAF12L1Q5VU92 463 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 WWP1Q9H0M0 922 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 VCX3BQ9H321 246 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 GRID1Q9ULK0 1009 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 MTO1Q9Y2Z2 717 aaKnown RBP7.61□□□□□ -1.19
NPHP3-208ENST00000490993 PTCH2Q9Y6C5 1203 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 MYH7BA7E2Y1 1941 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 H7C4K7 107 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 NPR3P17342 541 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 BEX3Q00994 111 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 IRF5Q13568 498 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 SLC10A6Q3KNW5 377 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 ATP13A4Q4VNC1 1196 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 TIGD7Q6NT04 549 aaPredicted RBP7.61□□□□□ -1.19
NPHP3-208ENST00000490993 TTC27Q6P3X3 843 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 YTHDF3Q7Z739 585 aaKnown RBP7.61□□□□□ -1.19
NPHP3-208ENST00000490993 ARRDC4Q8NCT1 418 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 GSDMBQ8TAX9 411 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 FAM84AQ96KN4 292 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 VPS11Q9H270 941 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 TSPYL2Q9H2G4 693 aaPredicted RBP7.61□□□□□ -1.19
NPHP3-208ENST00000490993 MANSC1Q9H8J5 431 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 APOBEC2Q9Y235 224 aaKnown RBP7.61□□□□□ -1.19
NPHP3-208ENST00000490993 RAD54BQ9Y620 910 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 CDY2AQ9Y6F7 541 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 DAB1O75553 588 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 HSPA4LO95757 839 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 CCDC130P13994 396 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 CYP2C18P33260 490 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 CDKN2BP42772 138 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 NFE2Q16621 373 aaPredicted RBP7.61□□□□□ -1.19
NPHP3-208ENST00000490993 FSCBQ5H9T9 825 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 PRAMEF19Q5SWL8 479 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 TBC1D1Q86TI0 1168 aaPredicted RBP7.61□□□□□ -1.19
NPHP3-208ENST00000490993 DEFB106AQ8N104 65 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 HTR3CQ8WXA8 447 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 BRI3BPQ8WY22 251 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 CD101Q93033 1021 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 SENP8Q96LD8 212 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 CPXM1Q96SM3 734 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 TTC1Q99614 292 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 AAR2Q9Y312 384 aaKnown RBP7.61□□□□□ -1.19
NPHP3-208ENST00000490993 PCDHB7Q9Y5E2 793 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 ANKRD31Q8N7Z5 1873 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 MAGEB16A2A368 324 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 ALOX15BO15296 676 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 STBD1O95210 358 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 SHBGP04278 402 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 DNAJB2P25686 324 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 CDH5P33151 784 aaPredicted RBP7.61□□□□□ -1.19
NPHP3-208ENST00000490993 IFI35P80217 286 aaPredicted RBP7.61□□□□□ -1.19
NPHP3-208ENST00000490993 BFSP2Q13515 415 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 SLC45A4Q5BKX6 768 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 LDLRAD1Q5T700 205 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 ILDR2Q71H61 639 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 FAM131BQ86XD5 332 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 B3GALNT2Q8NCR0 500 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 TTC16Q8NEE8 873 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 TFAP2BQ92481 460 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.61□□□□□ -1.19
NPHP3-208ENST00000490993 IFT43Q96FT9 208 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 VAT1Q99536 393 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 PPP1R12CQ9BZL4 782 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms