RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 USP8P40818 1118 aa16.16■□□□□ 0.18
VPS26A-207ENST00000490696 GPD2P43304 727 aa16.16■□□□□ 0.18
VPS26A-207ENST00000490696 RGS7P49802 495 aa16.16■□□□□ 0.18
VPS26A-207ENST00000490696 TCF15Q12870 199 aa16.16■□□□□ 0.18
VPS26A-207ENST00000490696 DENND1BQ6P3S1 775 aa16.16■□□□□ 0.18
VPS26A-207ENST00000490696 DHX40Q8IX18 779 aaKnown RBP16.16■□□□□ 0.18
VPS26A-207ENST00000490696 FAM71AQ8IYT1 594 aa16.16■□□□□ 0.18
VPS26A-207ENST00000490696 SCML4Q8N228 414 aa16.16■□□□□ 0.18
VPS26A-207ENST00000490696 ARHGAP18Q8N392 663 aa16.16■□□□□ 0.18
VPS26A-207ENST00000490696 CPA6Q8N4T0 437 aa16.16■□□□□ 0.18
VPS26A-207ENST00000490696 NDRG1Q92597 394 aaKnown RBP16.16■□□□□ 0.18
VPS26A-207ENST00000490696 WBP2Q969T9 261 aa16.16■□□□□ 0.18
VPS26A-207ENST00000490696 HSFY1Q96LI6 401 aa16.16■□□□□ 0.18
VPS26A-207ENST00000490696 NAA15Q9BXJ9 866 aaKnown RBP16.16■□□□□ 0.18
VPS26A-207ENST00000490696 KLF16Q9BXK1 252 aaPredicted RBP16.16■□□□□ 0.18
VPS26A-207ENST00000490696 PLCB1Q9NQ66 1216 aa16.16■□□□□ 0.18
VPS26A-207ENST00000490696 CNGB3Q9NQW8 809 aa16.16■□□□□ 0.18
VPS26A-207ENST00000490696 DNMT3LQ9UJW3 386 aa16.16■□□□□ 0.18
VPS26A-207ENST00000490696 NUDT5Q9UKK9 219 aa16.16■□□□□ 0.18
VPS26A-207ENST00000490696 NDRG2Q9UN36 371 aaKnown RBP16.16■□□□□ 0.18
VPS26A-207ENST00000490696 CACNA1IQ9P0X4 2223 aa16.15■□□□□ 0.18
VPS26A-207ENST00000490696 E2F8A0AVK6 867 aa16.15■□□□□ 0.18
VPS26A-207ENST00000490696 SYCE3A1L190 88 aa16.15■□□□□ 0.18
VPS26A-207ENST00000490696 LGALS16A8MUM7 142 aa16.15■□□□□ 0.18
VPS26A-207ENST00000490696 SLC9A3R1O14745 358 aaPredicted RBP16.15■□□□□ 0.18
VPS26A-207ENST00000490696 SCAMP3O14828 347 aaKnown RBP16.15■□□□□ 0.18
VPS26A-207ENST00000490696 MDM4O15151 490 aa16.15■□□□□ 0.18
VPS26A-207ENST00000490696 NCAM2O15394 837 aa16.15■□□□□ 0.18
VPS26A-207ENST00000490696 THAP12O43422 761 aa16.15■□□□□ 0.18
VPS26A-207ENST00000490696 GREM1O60565 184 aa16.15■□□□□ 0.18
VPS26A-207ENST00000490696 PNMA6AP0CW24 399 aaPredicted RBP16.15■□□□□ 0.18
VPS26A-207ENST00000490696 RALAP11233 206 aa16.15■□□□□ 0.18
VPS26A-207ENST00000490696 ATP1A3P13637 1013 aa16.15■□□□□ 0.18
VPS26A-207ENST00000490696 CLCN1P35523 988 aa16.15■□□□□ 0.18
VPS26A-207ENST00000490696 RPS9P46781 194 aaKnown RBP16.15■□□□□ 0.18
VPS26A-207ENST00000490696 RPL34P49207 117 aaKnown RBP16.15■□□□□ 0.18
VPS26A-207ENST00000490696 YWHAGP61981 247 aaKnown RBP eCLIP16.15■□□□□ 0.18
VPS26A-207ENST00000490696 NHLH1Q02575 133 aa16.15■□□□□ 0.18
VPS26A-207ENST00000490696 DRAP1Q14919 205 aaPredicted RBP16.15■□□□□ 0.18
VPS26A-207ENST00000490696 C10orf120Q5SQS8 335 aa16.15■□□□□ 0.18
VPS26A-207ENST00000490696 TADA2BQ86TJ2 420 aa16.15■□□□□ 0.18
VPS26A-207ENST00000490696 SIX6OS1Q8N1H7 587 aa16.15■□□□□ 0.18
VPS26A-207ENST00000490696 ANKRD20A12PQ8NF67 263 aa16.15■□□□□ 0.18
VPS26A-207ENST00000490696 CDK5RAP1Q96SZ6 601 aaKnown RBP16.15■□□□□ 0.18
VPS26A-207ENST00000490696 GANQ9H2C0 597 aa16.15■□□□□ 0.18
VPS26A-207ENST00000490696 YJEFN3A6XGL0 299 aa16.14■□□□□ 0.17
VPS26A-207ENST00000490696 E7ENQ6 273 aa16.14■□□□□ 0.17
VPS26A-207ENST00000490696 NFATC1O95644 943 aa16.14■□□□□ 0.17
VPS26A-207ENST00000490696 CHRNB1P11230 501 aa16.14■□□□□ 0.17
VPS26A-207ENST00000490696 LCP1P13796 627 aa16.14■□□□□ 0.17
VPS26A-207ENST00000490696 CDK11BP21127 795 aaKnown RBP16.14■□□□□ 0.17
VPS26A-207ENST00000490696 GJA4P35212 333 aa16.14■□□□□ 0.17
VPS26A-207ENST00000490696 MAGEA9P43362 315 aa16.14■□□□□ 0.17
VPS26A-207ENST00000490696 KLK7P49862 253 aa16.14■□□□□ 0.17
VPS26A-207ENST00000490696 ZNF165P49910 485 aa16.14■□□□□ 0.17
VPS26A-207ENST00000490696 DAOAP59103 153 aa16.14■□□□□ 0.17
VPS26A-207ENST00000490696 RAPGEF1Q13905 1077 aa16.14■□□□□ 0.17
VPS26A-207ENST00000490696 PON2Q15165 354 aa16.14■□□□□ 0.17
VPS26A-207ENST00000490696 FKBP15Q5T1M5 1219 aa16.14■□□□□ 0.17
VPS26A-207ENST00000490696 ADGRG2Q8IZP9 1017 aa16.14■□□□□ 0.17
VPS26A-207ENST00000490696 STK32AQ8WU08 396 aa16.14■□□□□ 0.17
VPS26A-207ENST00000490696 TBC1D14Q9P2M4 693 aa16.14■□□□□ 0.17
VPS26A-207ENST00000490696 SIK3Q9Y2K2 1263 aa16.14■□□□□ 0.17
VPS26A-207ENST00000490696 SH3BP1Q9Y3L3 701 aa16.14■□□□□ 0.17
VPS26A-207ENST00000490696 SMTNL1A8MU46 457 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 PIK3R2O00459 728 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 TRDMT1O14717 391 aaKnown RBP16.13■□□□□ 0.17
VPS26A-207ENST00000490696 CYP17A1P05093 508 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 IRF1P10914 325 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 PTPN5P54829 565 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 PTK2Q05397 1052 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 IQCB1Q15051 598 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 GAB4Q2WGN9 574 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 BSPRYQ5W0U4 402 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 NAIF1Q69YI7 327 aaPredicted RBP16.13■□□□□ 0.17
VPS26A-207ENST00000490696 HTR3DQ70Z44 454 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 SLC47A2Q86VL8 602 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 BBS7Q8IWZ6 715 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 IRGQQ8WZA9 623 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 OTUB2Q96DC9 234 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 SLC4A5Q9BY07 1137 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 STK33Q9BYT3 514 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 CHRDQ9H2X0 955 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 LMAN1LQ9HAT1 526 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 CYTH4Q9UIA0 394 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 PCDHGC3Q9UN70 934 aa16.13■□□□□ 0.17
VPS26A-207ENST00000490696 F8VZ95 297 aa16.12■□□□□ 0.17
VPS26A-207ENST00000490696 EPHB6O15197 1021 aa16.12■□□□□ 0.17
VPS26A-207ENST00000490696 FBXO21O94952 628 aa16.12■□□□□ 0.17
VPS26A-207ENST00000490696 BPIFB4P59827 614 aa16.12■□□□□ 0.17
VPS26A-207ENST00000490696 AMPD2Q01433 879 aa16.12■□□□□ 0.17
VPS26A-207ENST00000490696 GOLGA8FQ08AF8 430 aa16.12■□□□□ 0.17
VPS26A-207ENST00000490696 GOLGA8DPQ0D2H9 430 aa16.12■□□□□ 0.17
VPS26A-207ENST00000490696 EFEMP1Q12805 493 aa16.12■□□□□ 0.17
VPS26A-207ENST00000490696 NR1H3Q13133 447 aa16.12■□□□□ 0.17
VPS26A-207ENST00000490696 CCINQ13939 588 aa16.12■□□□□ 0.17
VPS26A-207ENST00000490696 DHCR24Q15392 516 aa16.12■□□□□ 0.17
VPS26A-207ENST00000490696 SYCP1Q15431 976 aa16.12■□□□□ 0.17
VPS26A-207ENST00000490696 SKOR2Q2VWA4 1001 aaPredicted RBP16.12■□□□□ 0.17
VPS26A-207ENST00000490696 TMEM196Q5HYL7 178 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms