RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	C1orf131	Q8NDD1	294 aa	Known RBP	19.5	■□□□□ 0.71
C4A-256	ENST00000490663	NEK11	Q8NG66	645 aa		19.5	■□□□□ 0.71
C4A-256	ENST00000490663	SLC20A1	Q8WUM9	679 aa		19.5	■□□□□ 0.71
C4A-256	ENST00000490663	KCTD13	Q8WZ19	329 aa		19.5	■□□□□ 0.71
C4A-256	ENST00000490663	RTN4	Q9NQC3	1192 aa	Known RBP	19.5	■□□□□ 0.71
C4A-256	ENST00000490663	CYLD	Q9NQC7	956 aa		19.5	■□□□□ 0.71
C4A-256	ENST00000490663	LRRC10B	A6NIK2	292 aa		19.49	■□□□□ 0.71
C4A-256	ENST00000490663		E5RJQ4	531 aa		19.49	■□□□□ 0.71
C4A-256	ENST00000490663	PFKL	P17858	780 aa		19.49	■□□□□ 0.71
C4A-256	ENST00000490663	TARS	P26639	723 aa	Known RBP	19.49	■□□□□ 0.71
C4A-256	ENST00000490663	TUB	P50607	506 aa		19.49	■□□□□ 0.71
C4A-256	ENST00000490663	STARD6	P59095	220 aa		19.49	■□□□□ 0.71
C4A-256	ENST00000490663	EML3	Q32P44	896 aa		19.49	■□□□□ 0.71
C4A-256	ENST00000490663	PM20D1	Q6GTS8	502 aa		19.49	■□□□□ 0.71
C4A-256	ENST00000490663	ASTL	Q6HA08	431 aa	Predicted RBP	19.49	■□□□□ 0.71
C4A-256	ENST00000490663	NOP9	Q86U38	636 aa	Known RBP	19.49	■□□□□ 0.71
C4A-256	ENST00000490663	WDTC1	Q8N5D0	677 aa		19.49	■□□□□ 0.71
C4A-256	ENST00000490663	OSCP1	Q8WVF1	389 aa		19.49	■□□□□ 0.71
C4A-256	ENST00000490663	CHFR	Q96EP1	664 aa		19.49	■□□□□ 0.71
C4A-256	ENST00000490663	ERGIC2	Q96RQ1	377 aa		19.49	■□□□□ 0.71
C4A-256	ENST00000490663	STK33	Q9BYT3	514 aa		19.49	■□□□□ 0.71
C4A-256	ENST00000490663	NYNRIN	Q9P2P1	1898 aa	Known RBP	19.49	■□□□□ 0.71
C4A-256	ENST00000490663	SPECC1L-ADORA2A	F8WAN1	911 aa		19.48	■□□□□ 0.71
C4A-256	ENST00000490663	SERPINC1	P01008	464 aa		19.48	■□□□□ 0.71
C4A-256	ENST00000490663	AVPR2	P30518	371 aa		19.48	■□□□□ 0.71
C4A-256	ENST00000490663	ATP5C1	P36542	298 aa	Known RBP	19.48	■□□□□ 0.71
C4A-256	ENST00000490663	JAM2	P57087	298 aa		19.48	■□□□□ 0.71
C4A-256	ENST00000490663	PLCB2	Q00722	1185 aa		19.48	■□□□□ 0.71
C4A-256	ENST00000490663	PRKCQ	Q04759	706 aa		19.48	■□□□□ 0.71
C4A-256	ENST00000490663	PDCL	Q13371	301 aa		19.48	■□□□□ 0.71
C4A-256	ENST00000490663	RUNX3	Q13761	415 aa		19.48	■□□□□ 0.71
C4A-256	ENST00000490663	ITPRIPL2	Q3MIP1	535 aa		19.48	■□□□□ 0.71
C4A-256	ENST00000490663	BTBD8	Q5XKL5	378 aa		19.48	■□□□□ 0.71
C4A-256	ENST00000490663	RSRC2	Q7L4I2	434 aa	Known RBP	19.48	■□□□□ 0.71
C4A-256	ENST00000490663	CCDC105	Q8IYK2	499 aa		19.48	■□□□□ 0.71
C4A-256	ENST00000490663	PJA1	Q8NG27	643 aa		19.48	■□□□□ 0.71
C4A-256	ENST00000490663	PIWIL1	Q96J94	861 aa	Known RBP	19.48	■□□□□ 0.71
C4A-256	ENST00000490663	DDX23	Q9BUQ8	820 aa	Known RBP	19.48	■□□□□ 0.71
C4A-256	ENST00000490663	KLF16	Q9BXK1	252 aa	Predicted RBP	19.48	■□□□□ 0.71
C4A-256	ENST00000490663	TSPY26P	Q9H489	355 aa		19.48	■□□□□ 0.71
C4A-256	ENST00000490663	LTB4R2	Q9NPC1	389 aa		19.48	■□□□□ 0.71
C4A-256	ENST00000490663	SH3BP1	Q9Y3L3	701 aa		19.48	■□□□□ 0.71
C4A-256	ENST00000490663	DOCK4	Q8N1I0	1966 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	KANSL1L	A0AUZ9	987 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	GOLGA6L19	H0YKK7	550 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	MME	P08473	750 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	RALA	P11233	206 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	GLUL	P15104	373 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	CYP11B1	P15538	503 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	TCF3	P15923	654 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	AOC1	P19801	751 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	COL9A1	P20849	921 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	CTH	P32929	405 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	FANCC	Q00597	558 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	ARID5A	Q03989	594 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	PON2	Q15165	354 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	BSPRY	Q5W0U4	402 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	BBS7	Q8IWZ6	715 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	SCUBE3	Q8IX30	993 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	RNF214	Q8ND24	703 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	SPAG5	Q96R06	1193 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	CPXM1	Q96SM3	734 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	CNGB3	Q9NQW8	809 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	SFMBT1	Q9UHJ3	866 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663	PCDHGC3	Q9UN70	934 aa		19.47	■□□□□ 0.71
C4A-256	ENST00000490663		A0A1B0GTH6	734 aa		19.46	■□□□□ 0.71
C4A-256	ENST00000490663	PAPSS1	O43252	624 aa	Predicted RBP	19.46	■□□□□ 0.71
C4A-256	ENST00000490663	MSI1	O43347	362 aa	Known RBP	19.46	■□□□□ 0.71
C4A-256	ENST00000490663	CYP17A1	P05093	508 aa		19.46	■□□□□ 0.71
C4A-256	ENST00000490663	KRT9	P35527	623 aa		19.46	■□□□□ 0.71
C4A-256	ENST00000490663	SOX5	P35711	763 aa		19.46	■□□□□ 0.71
C4A-256	ENST00000490663	PSEN1	P49768	467 aa		19.46	■□□□□ 0.71
C4A-256	ENST00000490663	PDGFRL	Q15198	375 aa		19.46	■□□□□ 0.71
C4A-256	ENST00000490663	FILIP1L	Q4L180	1135 aa		19.46	■□□□□ 0.71
C4A-256	ENST00000490663	LRSAM1	Q6UWE0	723 aa		19.46	■□□□□ 0.71
C4A-256	ENST00000490663	EPS8L1	Q8TE68	723 aa		19.46	■□□□□ 0.71
C4A-256	ENST00000490663	DDX1	Q92499	740 aa	Known RBP	19.46	■□□□□ 0.71
C4A-256	ENST00000490663	FAM3C	Q92520	227 aa		19.46	■□□□□ 0.71
C4A-256	ENST00000490663	SHD	Q96IW2	340 aa		19.46	■□□□□ 0.71
C4A-256	ENST00000490663	HSFY1	Q96LI6	401 aa		19.46	■□□□□ 0.71
C4A-256	ENST00000490663	SLC4A5	Q9BY07	1137 aa		19.46	■□□□□ 0.71
C4A-256	ENST00000490663	PDCL3	Q9H2J4	239 aa		19.46	■□□□□ 0.71
C4A-256	ENST00000490663	ECT2	Q9H8V3	914 aa		19.46	■□□□□ 0.71
C4A-256	ENST00000490663	TRPV5	Q9NQA5	729 aa		19.46	■□□□□ 0.71
C4A-256	ENST00000490663	RBM12	Q9NTZ6	932 aa	Known RBP	19.46	■□□□□ 0.71
C4A-256	ENST00000490663	CLIC5	Q9NZA1	410 aa		19.46	■□□□□ 0.71
C4A-256	ENST00000490663	DNMT3L	Q9UJW3	386 aa		19.46	■□□□□ 0.71
C4A-256	ENST00000490663	SLC12A8	A0AV02	714 aa		19.45	■□□□□ 0.7
C4A-256	ENST00000490663	FAM170B	A6NMN3	283 aa		19.45	■□□□□ 0.7
C4A-256	ENST00000490663	LTF	P02788	710 aa		19.45	■□□□□ 0.7
C4A-256	ENST00000490663	ERBB2	P04626	1255 aa		19.45	■□□□□ 0.7
C4A-256	ENST00000490663	TPM4	P67936	248 aa		19.45	■□□□□ 0.7
C4A-256	ENST00000490663	TAF5	Q15542	800 aa		19.45	■□□□□ 0.7
C4A-256	ENST00000490663	PTPN20	Q4JDL3	420 aa		19.45	■□□□□ 0.7
C4A-256	ENST00000490663	C2CD6	Q53TS8	623 aa		19.45	■□□□□ 0.7
C4A-256	ENST00000490663	ZNF852	Q6ZMS4	543 aa		19.45	■□□□□ 0.7
C4A-256	ENST00000490663	DDX42	Q86XP3	938 aa	Known RBP eCLIP	19.45	■□□□□ 0.7
C4A-256	ENST00000490663	ARHGAP18	Q8N392	663 aa		19.45	■□□□□ 0.7
C4A-256	ENST00000490663	CPA6	Q8N4T0	437 aa		19.45	■□□□□ 0.7
C4A-256	ENST00000490663	FAM149B1	Q96BN6	582 aa		19.45	■□□□□ 0.7

Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms