RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 ITPKAP23677 461 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 ASPAP45381 313 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 NDST1P52848 882 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 ZNF667Q5HYK9 610 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 EOGTQ5NDL2 527 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 HTR3DQ70Z44 454 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 SLC2A14Q8TDB8 520 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 WHAMMQ8TF30 809 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 SMARCD1Q96GM5 515 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 PAGE5Q96GU1 130 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 NMUR1Q9HB89 426 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 APOBEC3GQ9HC16 384 aaKnown RBP16.46■□□□□ 0.23
COL2A1-207ENST00000490609 CD93Q9NPY3 652 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 KRT82Q9NSB4 513 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 COMMD8Q9NX08 183 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 RCOR1Q9UKL0 485 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 CABIN1Q9Y6J0 2220 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 BAHCC1Q9P281 2608 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 TBC1D3BA6NDS4 549 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 PRRT4C9JH25 899 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 PHACTR2O75167 634 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 ASS1P00966 412 aaKnown RBP16.45■□□□□ 0.22
COL2A1-207ENST00000490609 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
COL2A1-207ENST00000490609 ZSCAN22P10073 491 aaPredicted RBP16.45■□□□□ 0.22
COL2A1-207ENST00000490609 IRF1P10914 325 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 CEACAM1P13688 526 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 MAP3K7CLP57077 242 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 ZNF252P-AS1Q0IIN9 211 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 BIRC3Q13489 604 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 KMT5BQ4FZB7 885 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 TRIM61Q5EBN2 209 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 DAB2IPQ5VWQ8 1189 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 EGFLAMQ63HQ2 1017 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 KIAA1211LQ6NV74 962 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 SLC23A3Q6PIS1 610 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 TOGARAM2Q6ZUX3 1019 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 SV2AQ7L0J3 742 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 LPCAT2Q7L5N7 544 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 PIP4P1Q86T03 277 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 SYT12Q8IV01 421 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 DEFB119Q8N690 84 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 TERB1Q8NA31 727 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 KCNV2Q8TDN2 545 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 MED10Q9BTT4 135 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 POLMQ9NP87 494 aaPredicted RBP16.45■□□□□ 0.22
COL2A1-207ENST00000490609 ATRXP46100 2492 aa16.45■□□□□ 0.22
COL2A1-207ENST00000490609 ATXN2Q99700 1313 aaKnown RBP16.45■□□□□ 0.22
COL2A1-207ENST00000490609 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.44■□□□□ 0.22
COL2A1-207ENST00000490609 TLR5O60602 858 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 ALDH1A2O94788 518 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 F13A1P00488 732 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 SLFN14P0C7P3 912 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 ENGP17813 658 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 WASP42768 502 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 AP3M2P53677 418 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 MCCD1P59942 119 aaPredicted RBP16.44■□□□□ 0.22
COL2A1-207ENST00000490609 SGSM1Q2NKQ1 1148 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 SPDYCQ5MJ68 293 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 CLEC20AQ6ZU45 233 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 SCD5Q86SK9 330 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 SLC41A1Q8IVJ1 513 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 ZNF513Q8N8E2 541 aaPredicted RBP16.44■□□□□ 0.22
COL2A1-207ENST00000490609 DEFB124Q8NES8 71 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 GATA6Q92908 595 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 SNX21Q969T3 373 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 ERLEC1Q96DZ1 483 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 TNIP3Q96KP6 325 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 CYLDQ9NQC7 956 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 FAM49BQ9NUQ9 324 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 MARK1Q9P0L2 795 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 DEC1Q9P2X7 70 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 NUDT5Q9UKK9 219 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 SH3BP1Q9Y3L3 701 aa16.44■□□□□ 0.22
COL2A1-207ENST00000490609 IGHV1OR15-9A0A0B4J2B8 117 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 MDM4O15151 490 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 CYP26A1O43174 497 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 CACNG3O60359 315 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 FAM193AP78312 1265 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 DNM1Q05193 864 aaKnown RBP16.43■□□□□ 0.22
COL2A1-207ENST00000490609 INCA1Q0VD86 236 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 FOXC1Q12948 553 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 ANO4Q32M45 955 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 UAP1L1Q3KQV9 507 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 C10orf76Q5T2E6 689 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 Q6ZNB5 142 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 KDF1Q8NAX2 398 aaPredicted RBP16.43■□□□□ 0.22
COL2A1-207ENST00000490609 TMC2Q8TDI7 906 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 HNRNPABQ99729 332 aaKnown RBP16.43■□□□□ 0.22
COL2A1-207ENST00000490609 GABRG3Q99928 467 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 SLC6A17Q9H1V8 727 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 CAPN10Q9HC96 672 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.43■□□□□ 0.22
COL2A1-207ENST00000490609 CALCOCO1Q9P1Z2 691 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 FBXO10Q9UK96 956 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 SCML2Q9UQR0 700 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 BPTFQ12830 3046 aa16.43■□□□□ 0.22
COL2A1-207ENST00000490609 PTPRBP23467 1997 aa16.42■□□□□ 0.22
COL2A1-207ENST00000490609 SMG1Q96Q15 3661 aaKnown RBP16.42■□□□□ 0.22
COL2A1-207ENST00000490609 WASH3PC4AMC7 463 aa16.42■□□□□ 0.22
COL2A1-207ENST00000490609 PDXKO00764 312 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms