RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 SCAND2PQ9GZW5 306 aaPredicted RBP11.89□□□□□ -0.51
DUBR-204ENST00000490441 SMOC1Q9H4F8 434 aa11.89□□□□□ -0.51
DUBR-204ENST00000490441 MMRN2Q9H8L6 949 aa11.89□□□□□ -0.51
DUBR-204ENST00000490441 CYP3A43Q9HB55 503 aa11.89□□□□□ -0.51
DUBR-204ENST00000490441 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.89□□□□□ -0.51
DUBR-204ENST00000490441 DEC1Q9P2X7 70 aa11.89□□□□□ -0.51
DUBR-204ENST00000490441 METRNQ9UJH8 293 aa11.89□□□□□ -0.51
DUBR-204ENST00000490441 LSM7Q9UK45 103 aaKnown RBP11.89□□□□□ -0.51
DUBR-204ENST00000490441 INVSQ9Y283 1065 aa11.89□□□□□ -0.51
DUBR-204ENST00000490441 CHD8Q9HCK8 2581 aa11.89□□□□□ -0.51
DUBR-204ENST00000490441 HOXC11O43248 304 aaPredicted RBP11.88□□□□□ -0.51
DUBR-204ENST00000490441 BEST1O76090 585 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 ZDHHC11BP0C7U3 371 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 TRIM49P0CI25 452 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 TRIM49CP0CI26 452 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 PSMC2P35998 433 aaKnown RBP11.88□□□□□ -0.51
DUBR-204ENST00000490441 TNFRSF4P43489 277 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 GCLMP48507 274 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 ADAM9Q13443 819 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 NFIL3Q16649 462 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 RNF43Q68DV7 783 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 KRBA2Q6ZNG9 492 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 CYP2U1Q7Z449 544 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 TRMT11Q7Z4G4 463 aaKnown RBP11.88□□□□□ -0.51
DUBR-204ENST00000490441 BBS7Q8IWZ6 715 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 GUF1Q8N442 669 aaKnown RBP11.88□□□□□ -0.51
DUBR-204ENST00000490441 NAT16Q8N8M0 369 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 C12orf29Q8N999 325 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 IL17RCQ8NAC3 791 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 ZMIZ2Q8NF64 920 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 MDGA1Q8NFP4 955 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 WHAMMQ8TF30 809 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 EDEM2Q9BV94 578 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 CSNK1G1Q9HCP0 422 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 SPHK2Q9NRA0 654 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 MAPK8IP1Q9UQF2 711 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 PCDHA5Q9Y5H7 936 aa11.88□□□□□ -0.51
DUBR-204ENST00000490441 THADAQ6YHU6 1953 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 FAM237AA0A1B0GTK4 181 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 A0A1W2PQ27 194 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 A0A1W2PQ64 194 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 A0A1W2PQD8 194 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 BCLAF3A2AJT9 711 aaKnown RBP11.87□□□□□ -0.51
DUBR-204ENST00000490441 SGK1O00141 431 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 ZBTB24O43167 697 aaPredicted RBP11.87□□□□□ -0.51
DUBR-204ENST00000490441 TULP3O75386 442 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 CD58P19256 250 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 ACO1P21399 889 aaKnown RBP11.87□□□□□ -0.51
DUBR-204ENST00000490441 ATP5C1P36542 298 aaKnown RBP11.87□□□□□ -0.51
DUBR-204ENST00000490441 DHPSP49366 369 aaPredicted RBP11.87□□□□□ -0.51
DUBR-204ENST00000490441 ENPEPQ07075 957 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 INCA1Q0VD86 236 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 DPYDQ12882 1025 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 BYSLQ13895 437 aaKnown RBP11.87□□□□□ -0.51
DUBR-204ENST00000490441 C1orf220Q5T0J3 134 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 PMS2CLQ68D20 193 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 TCEAL6Q6IPX3 200 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 CLEC20AQ6ZU45 233 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 TADA2BQ86TJ2 420 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 SFTPA1Q8IWL2 248 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 PGBD3Q8N328 593 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 TAS1R2Q8TE23 839 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 HMGB4Q8WW32 186 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 TCEAL3Q969E4 200 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 CYFIP2Q96F07 1278 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 CHAMP1Q96JM3 812 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 CNTNAP3BQ96NU0 1288 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 XPO6Q96QU8 1125 aaKnown RBP11.87□□□□□ -0.51
DUBR-204ENST00000490441 HNRNPABQ99729 332 aaKnown RBP11.87□□□□□ -0.51
DUBR-204ENST00000490441 DUSP9Q99956 384 aaKnown RBP11.87□□□□□ -0.51
DUBR-204ENST00000490441 CNTNAP3Q9BZ76 1288 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 PNPLA8Q9NP80 782 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 RXFP3Q9NSD7 469 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 SCML2Q9UQR0 700 aa11.87□□□□□ -0.51
DUBR-204ENST00000490441 NUP205Q92621 2012 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 A0A0A0MRY4 1105 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 TCRBV21S2A2A0A5A6 115 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 ANTXRLA6NF34 631 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 KHNYNO15037 678 aaKnown RBP11.86□□□□□ -0.51
DUBR-204ENST00000490441 CYP26A1O43174 497 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 STX10O60499 249 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 EPB41P11171 864 aaKnown RBP11.86□□□□□ -0.51
DUBR-204ENST00000490441 BCKDHBP21953 392 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 GTF2H1P32780 548 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 KIR2DL1P43626 348 aaPredicted RBP11.86□□□□□ -0.51
DUBR-204ENST00000490441 PPP3CAQ08209 521 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 MESP2Q0VG99 397 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 C10orf76Q5T2E6 689 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 EMC10Q5UCC4 262 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 KRT39Q6A163 491 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 GRAMD4Q6IC98 578 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 HTR3DQ70Z44 454 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 LPCAT2Q7L5N7 544 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 TMEM25Q86YD3 366 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 ETFBKMTQ8IXQ9 262 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 TTC39CQ8N584 583 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 ZNF513Q8N8E2 541 aaPredicted RBP11.86□□□□□ -0.51
DUBR-204ENST00000490441 TERB1Q8NA31 727 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 TWNKQ96RR1 684 aa11.86□□□□□ -0.51
DUBR-204ENST00000490441 APOBEC3GQ9HC16 384 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms