RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 MYH10P35580 1976 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 APC2O95996 2303 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 ZNF233A6NK53 670 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 GFRA2O00451 464 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 COCHO43405 550 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 SH3BP5O60239 455 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 CACNG3O60359 315 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 CBFA2T3O75081 653 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 STAU1O95793 577 aaKnown RBP8.7□□□□□ -1.02
USP39-216ENST00000490193 ABL1P00519 1130 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 ZDHHC11BP0C7U3 371 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 PTPN1P18031 435 aaKnown RBP8.7□□□□□ -1.02
USP39-216ENST00000490193 NDUFV2P19404 249 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 YWHAQP27348 245 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 GNL1P36915 607 aaPredicted RBP8.7□□□□□ -1.02
USP39-216ENST00000490193 SF3A1Q15459 793 aaKnown RBP8.7□□□□□ -1.02
USP39-216ENST00000490193 C10orf76Q5T2E6 689 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 HECTD3Q5T447 861 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 EGFLAMQ63HQ2 1017 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 SV2BQ7L1I2 683 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 TRAPPC11Q7Z392 1133 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 METTL3Q86U44 580 aaKnown RBP8.7□□□□□ -1.02
USP39-216ENST00000490193 TMEM25Q86YD3 366 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 MIB1Q86YT6 1006 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 NAXDQ8IW45 347 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 BBS7Q8IWZ6 715 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 SYCP3Q8IZU3 236 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 TRIML1Q8N9V2 468 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 IPO4Q8TEX9 1081 aaKnown RBP8.7□□□□□ -1.02
USP39-216ENST00000490193 DNASE2BQ8WZ79 361 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 FOXJ1Q92949 421 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 HSPA12BQ96MM6 686 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 CAMK1GQ96NX5 476 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 MMS19Q96T76 1030 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 MRPL45Q9BRJ2 306 aaKnown RBP8.7□□□□□ -1.02
USP39-216ENST00000490193 FGFBP2Q9BYJ0 223 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 SNX25Q9H3E2 840 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 PCIF1Q9H4Z3 704 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 CCDC86Q9H6F5 360 aaKnown RBP8.7□□□□□ -1.02
USP39-216ENST00000490193 KIAA1586Q9HCI6 787 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 COMMD8Q9NX08 183 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 MARK1Q9P0L2 795 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 TBC1D7Q9P0N9 293 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 KIAA1522Q9P206 1035 aaPredicted RBP8.7□□□□□ -1.02
USP39-216ENST00000490193 KIAA1468Q9P260 1216 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 CCDC39Q9UFE4 941 aa8.7□□□□□ -1.02
USP39-216ENST00000490193 APOBEC2Q9Y235 224 aaKnown RBP8.7□□□□□ -1.02
USP39-216ENST00000490193 HELZ2Q9BYK8 2649 aaKnown RBP8.69□□□□□ -1.02
USP39-216ENST00000490193 ZBTB24O43167 697 aaPredicted RBP8.69□□□□□ -1.02
USP39-216ENST00000490193 GREM1O60565 184 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 DKK1O94907 266 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 ZNF883P0CG24 379 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 GNSP15586 552 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 GRIK2Q13002 908 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 COL28A1Q2UY09 1125 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 PLEKHG6Q3KR16 790 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 SYCP2LQ5T4T6 812 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 RRAGBQ5VZM2 374 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 GRAMD4Q6IC98 578 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 SDE2Q6IQ49 451 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 TOGARAM2Q6ZUX3 1019 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 HTR3DQ70Z44 454 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 HS2ST1Q7LGA3 356 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 CBWD2Q8IUF1 395 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 DEFB119Q8N690 84 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 NAT16Q8N8M0 369 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 B3GALNT2Q8NCR0 500 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 FBXO32Q969P5 355 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 TMX3Q96JJ7 454 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 MRGPRX1Q96LB2 322 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 B3GNT5Q9BYG0 378 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 ZNF518BQ9C0D4 1074 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 DPEP3Q9H4B8 488 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 FBXO2Q9UK22 296 aaPredicted RBP8.69□□□□□ -1.02
USP39-216ENST00000490193 PCOLCE2Q9UKZ9 415 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 CYP8B1Q9UNU6 501 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 SH3BP1Q9Y3L3 701 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 PCDHB9Q9Y5E1 797 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 SRPRBQ9Y5M8 271 aaKnown RBP8.69□□□□□ -1.02
USP39-216ENST00000490193 MORC2Q9Y6X9 1032 aaPredicted RBP8.69□□□□□ -1.02
USP39-216ENST00000490193 CKAP5Q14008 2032 aa8.69□□□□□ -1.02
USP39-216ENST00000490193 A0A1B0GTW7 788 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 PRRT4C9JH25 899 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 CLDN5O00501 218 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 TRIM24O15164 1050 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 PRPF6O94906 941 aaKnown RBP8.68□□□□□ -1.02
USP39-216ENST00000490193 CST3P01034 146 aaPredicted RBP8.68□□□□□ -1.02
USP39-216ENST00000490193 IDEP14735 1019 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 TXLNAP40222 546 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 WASP42768 502 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 ZNF132P52740 706 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 SLC5A3P53794 718 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 RABEP1Q15276 862 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 ANO4Q32M45 955 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 WDR45BQ5MNZ6 344 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 C19orf48Q6RUI8 117 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 DBX2Q6ZNG2 339 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 CCDC73Q6ZRK6 1079 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 PAQR9Q6ZVX9 377 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 STXBP4Q6ZWJ1 553 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms