RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 PGBD3Q8N328 593 aa11.32□□□□□ -0.6
UBP1-211ENST00000490112 TMEM174Q8WUU8 243 aa11.32□□□□□ -0.6
UBP1-211ENST00000490112 TAF4BQ92750 862 aa11.32□□□□□ -0.6
UBP1-211ENST00000490112 DNAI2Q9GZS0 605 aa11.32□□□□□ -0.6
UBP1-211ENST00000490112 SLC32A1Q9H598 525 aa11.32□□□□□ -0.6
UBP1-211ENST00000490112 SPHK2Q9NRA0 654 aa11.32□□□□□ -0.6
UBP1-211ENST00000490112 CHORDC1Q9UHD1 332 aaPredicted RBP11.32□□□□□ -0.6
UBP1-211ENST00000490112 WDFY3Q8IZQ1 3526 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 FAM92AA1XBS5 289 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 TMEM8BA6NDV4 472 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 K7ELQ4 463 aaPredicted RBP11.31□□□□□ -0.6
UBP1-211ENST00000490112 CLDN5O00501 218 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 CDX4O14627 284 aaPredicted RBP11.31□□□□□ -0.6
UBP1-211ENST00000490112 ZDHHC11BP0C7U3 371 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 BCKDHBP21953 392 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 SLC5A3P53794 718 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 IRX4P78413 519 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 NCOA4Q13772 614 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 TRIM61Q5EBN2 209 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 ATL3Q6DD88 541 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 SDE2Q6IQ49 451 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 SLC23A3Q6PIS1 610 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 SHC4Q6S5L8 630 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 FAM35AQ86V20 835 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 UNC93AQ86WB7 457 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 SLC9A9Q8IVB4 645 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 ETFBKMTQ8IXQ9 262 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 CEP57L1Q8IYX8 460 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 ZNF513Q8N8E2 541 aaPredicted RBP11.31□□□□□ -0.6
UBP1-211ENST00000490112 PARD3BQ8TEW8 1205 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 HMGB4Q8WW32 186 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 XPO6Q96QU8 1125 aaKnown RBP11.31□□□□□ -0.6
UBP1-211ENST00000490112 KCNK16Q96T55 309 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 SLC39A2Q9NP94 309 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 TLR8Q9NR97 1041 aaKnown RBP11.31□□□□□ -0.6
UBP1-211ENST00000490112 TMEM30AQ9NV96 361 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 WDR35Q9P2L0 1181 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 STARD13Q9Y3M8 1113 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 NME7Q9Y5B8 376 aa11.31□□□□□ -0.6
UBP1-211ENST00000490112 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 TCRBV21S2A2A0A5A6 115 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 UPK3BL1B0FP48 263 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 UPK3BL2E5RIL1 263 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 ADAM23O75077 832 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 ZNF217O75362 1048 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 TULP3O75386 442 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 AP1G2O75843 785 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 NTSR1P30989 418 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 RDXP35241 583 aaKnown RBP11.3□□□□□ -0.6
UBP1-211ENST00000490112 ATXN3P54252 364 aaPredicted RBP11.3□□□□□ -0.6
UBP1-211ENST00000490112 CDH8P55286 799 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 KDSRQ06136 332 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 ANO4Q32M45 955 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 MAP7D1Q3KQU3 841 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 UAP1L1Q3KQV9 507 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 SWT1Q5T5J6 900 aaKnown RBP11.3□□□□□ -0.6
UBP1-211ENST00000490112 PEAR1Q5VY43 1037 aaPredicted RBP11.3□□□□□ -0.6
UBP1-211ENST00000490112 LYSMD4Q5XG99 296 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 UNQ6494/PRO21346Q6UXR6 183 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 HTR3DQ70Z44 454 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 C12orf40Q86WS4 652 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 TMEFF1Q8IYR6 380 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 CRYBG2Q8N1P7 616 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 PHTF2Q8N3S3 785 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 TERB1Q8NA31 727 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 SCAMP5Q8TAC9 235 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 GZF1Q9H116 711 aaPredicted RBP11.3□□□□□ -0.6
UBP1-211ENST00000490112 SMYD3Q9H7B4 428 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 CCSER2Q9H7U1 834 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 CSNK1G1Q9HCP0 422 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.3□□□□□ -0.6
UBP1-211ENST00000490112 LSM7Q9UK45 103 aaKnown RBP11.3□□□□□ -0.6
UBP1-211ENST00000490112 CFAP45Q9UL16 551 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 PLXND1Q9Y4D7 1925 aa11.3□□□□□ -0.6
UBP1-211ENST00000490112 PATE3B3GLJ2 98 aa11.29□□□□□ -0.6
UBP1-211ENST00000490112 SCAMP3O14828 347 aaKnown RBP11.29□□□□□ -0.6
UBP1-211ENST00000490112 IKBKBO14920 756 aa11.29□□□□□ -0.6
UBP1-211ENST00000490112 TLR5O60602 858 aa11.29□□□□□ -0.6
UBP1-211ENST00000490112 KIF20AO95235 890 aa11.29□□□□□ -0.6
UBP1-211ENST00000490112 C4BPAP04003 597 aaKnown RBP11.29□□□□□ -0.6
UBP1-211ENST00000490112 HNRNPLP14866 589 aaKnown RBP eCLIP11.29□□□□□ -0.6
UBP1-211ENST00000490112 ATP5C1P36542 298 aaKnown RBP11.29□□□□□ -0.6
UBP1-211ENST00000490112 ME1P48163 572 aa11.29□□□□□ -0.6
UBP1-211ENST00000490112 RPL6Q02878 288 aaKnown RBP11.29□□□□□ -0.6
UBP1-211ENST00000490112 GFPT1Q06210 699 aaPredicted RBP11.29□□□□□ -0.6
UBP1-211ENST00000490112 E2F5Q15329 346 aa11.29□□□□□ -0.6
UBP1-211ENST00000490112 DUOXA1Q1HG43 343 aa11.29□□□□□ -0.6
UBP1-211ENST00000490112 C10orf76Q5T2E6 689 aa11.29□□□□□ -0.6
UBP1-211ENST00000490112 EMC10Q5UCC4 262 aa11.29□□□□□ -0.6
UBP1-211ENST00000490112 GRAMD4Q6IC98 578 aa11.29□□□□□ -0.6
UBP1-211ENST00000490112 PAQR9Q6ZVX9 377 aa11.29□□□□□ -0.6
UBP1-211ENST00000490112 TADA2BQ86TJ2 420 aa11.29□□□□□ -0.6
UBP1-211ENST00000490112 ACOT1Q86TX2 421 aa11.29□□□□□ -0.6
UBP1-211ENST00000490112 BBS7Q8IWZ6 715 aa11.29□□□□□ -0.6
UBP1-211ENST00000490112 FUKQ8N0W3 1084 aa11.29□□□□□ -0.6
UBP1-211ENST00000490112 HDDC3Q8N4P3 179 aa11.29□□□□□ -0.6
UBP1-211ENST00000490112 NAT16Q8N8M0 369 aa11.29□□□□□ -0.6
UBP1-211ENST00000490112 KDF1Q8NAX2 398 aaPredicted RBP11.29□□□□□ -0.6
UBP1-211ENST00000490112 TTC13Q8NBP0 860 aa11.29□□□□□ -0.6
UBP1-211ENST00000490112 RLN3Q8WXF3 142 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms