RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 TRIM49D1C9J1S8 452 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 PTPN4P29074 926 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 CYP51A1Q16850 503 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 FOXR2Q6PJQ5 311 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 CDK20Q8IZL9 346 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 TMEM169Q96HH4 297 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 KCNF1Q9H3M0 494 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 CXorf56Q9H5V9 222 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 RNF181Q9P0P0 153 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 GUCY1B2O75343 617 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 PPIL2Q13356 520 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 C10orf120Q5SQS8 335 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 TMPRSS6Q8IU80 811 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 C4orf33Q8N1A6 199 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 ARRDC4Q8NCT1 418 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 MYOZ2Q9NPC6 264 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 C1orf167Q5SNV9 1468 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 CCNG1P51959 295 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 FCGRTP55899 365 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 POLR2LP62875 67 aaKnown RBP9.12□□□□□ -0.95
LSAMP-205ENST00000490035 MSLNQ13421 630 aaPredicted RBP9.12□□□□□ -0.95
LSAMP-205ENST00000490035 INSCQ1MX18 579 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 NT5DC1Q5TFE4 455 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 CYB5D1Q6P9G0 228 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 ADCK2Q7Z695 626 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 SLC40A1Q9NP59 571 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 TLR8Q9NR97 1041 aaKnown RBP9.12□□□□□ -0.95
LSAMP-205ENST00000490035 THAP1Q9NVV9 213 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 CEMIPQ8WUJ3 1361 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 MGAT4DA6NG13 374 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 TBC1D12O60347 775 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 PDE9AO76083 593 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 SEC24DO94855 1032 aaPredicted RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 GLP2RO95838 553 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 ITGALP20701 1170 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 FASP25445 335 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 KLRC1P26715 233 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 RCN1Q15293 331 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 TAF1CQ15572 869 aaPredicted RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 ATP6AP1LQ52LC2 224 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 FAM98BQ52LJ0 330 aaKnown RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 MSL3Q8N5Y2 521 aaKnown RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 FAM71DQ8N9W8 422 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 BTN2A2Q8WVV5 523 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 COPS7BQ9H9Q2 264 aaPredicted RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 ADGRA2Q96PE1 1338 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 KRT6AP02538 564 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 KRT6BP04259 564 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 CHI3L1P36222 383 aaPredicted RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 KRT6CP48668 564 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 CNGA2Q16280 664 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 MGAT5BQ3V5L5 792 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 ARID3BQ8IVW6 561 aaPredicted RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 HS6ST3Q8IZP7 471 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 CPNE1Q99829 537 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 AVENQ9NQS1 362 aaPredicted RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 USE1Q9NZ43 259 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 C6orf203Q9P0P8 240 aaPredicted RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 DNPEPQ9ULA0 475 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 SALL1Q9NSC2 1324 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 PHF20L1A8MW92 1017 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 CAMTA2O94983 1202 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 SOAT1P35610 550 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 RPL3P39023 403 aaKnown RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 FKBP1AP62942 108 aaKnown RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 MYCBPAPQ8TBZ2 947 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 FAM153AQ9UHL3 310 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 ACOT9Q9Y305 439 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 TMX2Q9Y320 296 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 MYH15Q9Y2K3 1946 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 TNFAIP8O95379 198 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 ITGB3P05106 788 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 ZNF268Q14587 947 aaPredicted RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 C19orf18Q8NEA5 215 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 CENPTQ96BT3 561 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 KCND1Q9NSA2 647 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 COPG2Q9UBF2 871 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 GOLGA4Q13439 2230 aaKnown RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 FAM220BPB1ANY3 271 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 PDGFRBP09619 1106 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 C6orf222P0C671 652 aaPredicted RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 CYP2A7P20853 494 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 PTPN7P35236 360 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 BST2Q10589 180 aaKnown RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 PDIA6Q15084 440 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 DDR2Q16832 855 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 CYP4A22Q5TCH4 519 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 ZNF662Q6ZS27 426 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 MRPS31Q92665 395 aaKnown RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 NLNQ9BYT8 704 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 MTMR12Q9C0I1 747 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 CYP39A1Q9NYL5 469 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 CORO2BQ9UQ03 480 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 HPSEQ9Y251 543 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 F8VZ95 297 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 ASS1P00966 412 aaKnown RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 TROAPQ12815 778 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 TSNQ15631 228 aaKnown RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 SLC44A4Q53GD3 710 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 KYQ8NBH2 561 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms