RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 BMPR1AP36894 532 aa22.6■■□□□ 1.21
SMC4-221ENST00000489573 MAGEA10P43363 369 aaPredicted RBP22.6■■□□□ 1.21
SMC4-221ENST00000489573 TUFMP49411 452 aaKnown RBP22.6■■□□□ 1.21
SMC4-221ENST00000489573 RAB33AQ14088 237 aa22.6■■□□□ 1.21
SMC4-221ENST00000489573 C9orf50Q5SZB4 431 aa22.6■■□□□ 1.21
SMC4-221ENST00000489573 OTUD1Q5VV17 481 aaPredicted RBP22.6■■□□□ 1.21
SMC4-221ENST00000489573 BSPRYQ5W0U4 402 aa22.6■■□□□ 1.21
SMC4-221ENST00000489573 SCYL2Q6P3W7 929 aa22.6■■□□□ 1.21
SMC4-221ENST00000489573 DENND5BQ6ZUT9 1274 aa22.6■■□□□ 1.21
SMC4-221ENST00000489573 CYP4V2Q6ZWL3 525 aaPredicted RBP22.6■■□□□ 1.21
SMC4-221ENST00000489573 ZNF461Q8TAF7 563 aa22.6■■□□□ 1.21
SMC4-221ENST00000489573 ACSF2Q96CM8 615 aaPredicted RBP22.6■■□□□ 1.21
SMC4-221ENST00000489573 AP1M1Q9BXS5 423 aa22.6■■□□□ 1.21
SMC4-221ENST00000489573 COMMD8Q9NX08 183 aa22.6■■□□□ 1.21
SMC4-221ENST00000489573 COL4A4P53420 1690 aaPredicted RBP22.6■■□□□ 1.21
SMC4-221ENST00000489573 GOLGA6L10A0A0M3HER8 536 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 LRRD1A4D1F6 860 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 LINC01553A4QN01 128 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 PI4K2BG5E9Z4 385 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 CCDC188H7C350 402 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 RARAP10276 462 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 COPS2P61201 443 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 YWHAGP61981 247 aaKnown RBP eCLIP22.59■■□□□ 1.211e-117■■■■■ 400.8
SMC4-221ENST00000489573 NAA30Q147X3 362 aaPredicted RBP22.59■■□□□ 1.21
SMC4-221ENST00000489573 BOLA3Q53S33 107 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 KCNT1Q5JUK3 1230 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 BNIPLQ7Z465 357 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 STKLD1Q8NE28 680 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 TEKT4Q8WW24 435 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 RAPGEF5Q92565 580 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 CEP295NLQ96MC4 621 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 RXFP1Q9HBX9 757 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 IL37Q9NZH6 218 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 M0QYT0 321 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 FSCN2O14926 492 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 LILRB3O75022 631 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 ENDOD1O94919 500 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 ATF2P15336 505 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 RDXP35241 583 aaKnown RBP22.59■■□□□ 1.21
SMC4-221ENST00000489573 PITX1P78337 314 aaPredicted RBP22.59■■□□□ 1.21
SMC4-221ENST00000489573 ELF2Q15723 593 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 MFSD7Q6UXD7 560 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 SPOCD1Q6ZMY3 1216 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 ADAT2Q7Z6V5 191 aaKnown RBP22.59■■□□□ 1.21
SMC4-221ENST00000489573 CMASQ8NFW8 434 aaPredicted RBP22.59■■□□□ 1.21
SMC4-221ENST00000489573 SLC7A14Q8TBB6 771 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 GPR152Q8TDT2 470 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 MAIP1Q8WWC4 291 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 HSPH1Q92598 858 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 EDEM1Q92611 657 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 OSBPL8Q9BZF1 889 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 LZTS1Q9Y250 596 aa22.59■■□□□ 1.21
SMC4-221ENST00000489573 RALAP11233 206 aa22.58■■□□□ 1.2
SMC4-221ENST00000489573 ATF6P18850 670 aa22.58■■□□□ 1.2
SMC4-221ENST00000489573 YWHAQP27348 245 aa22.58■■□□□ 1.2
SMC4-221ENST00000489573 PTPN7P35236 360 aa22.58■■□□□ 1.2
SMC4-221ENST00000489573 ATXN1P54253 815 aaKnown RBP22.58■■□□□ 1.2
SMC4-221ENST00000489573 USP46P62068 366 aa22.58■■□□□ 1.2
SMC4-221ENST00000489573 BTBD8Q5XKL5 378 aa22.58■■□□□ 1.2
SMC4-221ENST00000489573 ARHGAP18Q8N392 663 aa22.58■■□□□ 1.2
SMC4-221ENST00000489573 ABCC13Q9NSE7 274 aa22.58■■□□□ 1.2
SMC4-221ENST00000489573 CALCOCO1Q9P1Z2 691 aa22.58■■□□□ 1.2
SMC4-221ENST00000489573 MTUS1Q9ULD2 1270 aa22.58■■□□□ 1.2
SMC4-221ENST00000489573 FAM92AA1XBS5 289 aa22.57■■□□□ 1.2
SMC4-221ENST00000489573 C3orf70A6NLC5 250 aaPredicted RBP22.57■■□□□ 1.2
SMC4-221ENST00000489573 MDM4O15151 490 aa22.57■■□□□ 1.2
SMC4-221ENST00000489573 TEX28O15482 410 aa22.57■■□□□ 1.2
SMC4-221ENST00000489573 SEC24AO95486 1093 aa22.57■■□□□ 1.2
SMC4-221ENST00000489573 KDELR1P24390 212 aa22.57■■□□□ 1.2
SMC4-221ENST00000489573 CA8P35219 290 aa22.57■■□□□ 1.2
SMC4-221ENST00000489573 PLXNA3P51805 1871 aa22.57■■□□□ 1.2
SMC4-221ENST00000489573 DEUP1Q05D60 604 aa22.57■■□□□ 1.2
SMC4-221ENST00000489573 SHHQ15465 462 aa22.57■■□□□ 1.2
SMC4-221ENST00000489573 PPP2R5EQ16537 467 aa22.57■■□□□ 1.2
SMC4-221ENST00000489573 ANKS1BQ7Z6G8 1248 aa22.57■■□□□ 1.2
SMC4-221ENST00000489573 SCD5Q86SK9 330 aa22.57■■□□□ 1.2
SMC4-221ENST00000489573 MON1AQ86VX9 555 aa22.57■■□□□ 1.2
SMC4-221ENST00000489573 KCTD6Q8NC69 237 aa22.57■■□□□ 1.2
SMC4-221ENST00000489573 FBXO32Q969P5 355 aa22.57■■□□□ 1.2
SMC4-221ENST00000489573 PGAP3Q96FM1 320 aaPredicted RBP22.57■■□□□ 1.2
SMC4-221ENST00000489573 SNRNP25Q9BV90 132 aaKnown RBP22.57■■□□□ 1.2
SMC4-221ENST00000489573 CYP4F11Q9HBI6 524 aa22.57■■□□□ 1.2
SMC4-221ENST00000489573 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.57■■□□□ 1.2
SMC4-221ENST00000489573 A0A1W2PQH9 124 aa22.56■■□□□ 1.2
SMC4-221ENST00000489573 TCRBV7S2A1N4TA0A589 114 aa22.56■■□□□ 1.2
SMC4-221ENST00000489573 SLC38A8A6NNN8 435 aa22.56■■□□□ 1.2
SMC4-221ENST00000489573 CDKN2BP42772 138 aa22.56■■□□□ 1.2
SMC4-221ENST00000489573 LLGL1Q15334 1064 aa22.56■■□□□ 1.2
SMC4-221ENST00000489573 TFDP3Q5H9I0 405 aa22.56■■□□□ 1.2
SMC4-221ENST00000489573 CCDC70Q6NSX1 233 aa22.56■■□□□ 1.2
SMC4-221ENST00000489573 TMC7Q7Z402 723 aa22.56■■□□□ 1.2
SMC4-221ENST00000489573 GIPC2Q8TF65 315 aa22.56■■□□□ 1.2
SMC4-221ENST00000489573 TSC1Q92574 1164 aa22.56■■□□□ 1.2
SMC4-221ENST00000489573 KRT12Q99456 494 aa22.56■■□□□ 1.2
SMC4-221ENST00000489573 HERPUD2Q9BSE4 406 aa22.56■■□□□ 1.2
SMC4-221ENST00000489573 FAM204AQ9H8W3 233 aa22.56■■□□□ 1.2
SMC4-221ENST00000489573 GMIPQ9P107 970 aa22.56■■□□□ 1.2
SMC4-221ENST00000489573 MAFFQ9ULX9 164 aa22.56■■□□□ 1.2
SMC4-221ENST00000489573 NR2E1Q9Y466 385 aa22.56■■□□□ 1.2
SMC4-221ENST00000489573 MYO16Q9Y6X6 1858 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms