RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 C1orf186Q6ZWK4 172 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 KIAA1958Q8N8K9 716 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 TERB1Q8NA31 727 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 C1orf216Q8TAB5 229 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 FGF11Q92914 225 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 GABRG3Q99928 467 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 C17orf75Q9HAS0 396 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 BRMS1Q9HCU9 246 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 WSB2Q9NYS7 404 aaPredicted RBP9.82□□□□□ -0.84
SSBP1-212ENST00000489378 ORC3Q9UBD5 711 aaPredicted RBP9.82□□□□□ -0.84
SSBP1-212ENST00000489378 EIF2B4Q9UI10 523 aaKnown RBP9.82□□□□□ -0.84
SSBP1-212ENST00000489378 GTF3C4Q9UKN8 822 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 SNX11Q9Y5W9 270 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 NUMA1Q14980 2115 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 ZNF840PA6NDX5 716 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 METTL12A8MUP2 240 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 KPNA7A9QM74 516 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 KCNJ18B7U540 433 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 CBX4O00257 560 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 OGTO15294 1046 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 WIPF1O43516 503 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 BRINP1O60477 761 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 OLFM2O95897 454 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 OR52Z1P0C646 297 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 FDPSP14324 419 aaKnown RBP9.81□□□□□ -0.84
SSBP1-212ENST00000489378 PFKLP17858 780 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 CSRP3P50461 194 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 RHDQ02161 417 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 GAD2Q05329 585 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 RAD51AP2Q09MP3 1159 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 KCNH2Q12809 1159 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 KYAT1Q16773 422 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 INTS6LQ5JSJ4 861 aaKnown RBP9.81□□□□□ -0.84
SSBP1-212ENST00000489378 USP49Q70CQ1 688 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 ERICH1Q86X53 443 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 DIS3L2Q8IYB7 885 aaKnown RBP9.81□□□□□ -0.84
SSBP1-212ENST00000489378 PDCL2Q8N4E4 241 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 CADM4Q8NFZ8 388 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 BICD1Q96G01 975 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 TMEM176AQ96HP8 235 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 NRSN2Q9GZP1 204 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 CPNE5Q9HCH3 593 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 DDX43Q9NXZ2 648 aaKnown RBP9.81□□□□□ -0.84
SSBP1-212ENST00000489378 DPP3Q9NY33 737 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 TRPM5Q9NZQ8 1165 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 DEC1Q9P2X7 70 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 FTSJ1Q9UET6 329 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 STARD13Q9Y3M8 1113 aa9.81□□□□□ -0.84
SSBP1-212ENST00000489378 FLNCQ14315 2725 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 LRRK2Q5S007 2527 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 WASH3PC4AMC7 463 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 HOXC11O43248 304 aaPredicted RBP9.8□□□□□ -0.84
SSBP1-212ENST00000489378 CDC45O75419 566 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 PLS3P13797 630 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 CDC25AP30304 524 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 HNF1BP35680 557 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 LIG4P49917 911 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 SH3BP2P78314 561 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 IL9RQ01113 521 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 SF3A1Q15459 793 aaKnown RBP9.8□□□□□ -0.84
SSBP1-212ENST00000489378 ZNF174Q15697 407 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 CFAP221Q4G0U5 840 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 ARHGAP40Q5TG30 622 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 BTBD8Q5XKL5 378 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 SDE2Q6IQ49 451 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 KCNK18Q7Z418 384 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 OSTM1Q86WC4 334 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 TMEM25Q86YD3 366 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 SPATA2LQ8IUW3 424 aaPredicted RBP9.8□□□□□ -0.84
SSBP1-212ENST00000489378 CD302Q8IX05 232 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 TTC9Q92623 222 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 ACBD6Q9BR61 282 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 TRIM4Q9C037 500 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 USP36Q9P275 1121 aaKnown RBP9.8□□□□□ -0.84
SSBP1-212ENST00000489378 CPSF3Q9UKF6 684 aaKnown RBP9.8□□□□□ -0.84
SSBP1-212ENST00000489378 L1RE1Q9UN81 338 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 DERAQ9Y315 318 aa9.8□□□□□ -0.84
SSBP1-212ENST00000489378 PRRT4C9JH25 899 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 H0Y8X5 98 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 PCDHGA12O60330 932 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 ABL1P00519 1130 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 OAS1P00973 400 aaKnown RBP9.79□□□□□ -0.84
SSBP1-212ENST00000489378 NTRK1P04629 796 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 MBL2P11226 248 aaPredicted RBP9.79□□□□□ -0.84
SSBP1-212ENST00000489378 GRIK1P39086 918 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 SMTNP53814 917 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 ANO4Q32M45 955 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 SV2CQ496J9 727 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 KCNT1Q5JUK3 1230 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 HES3Q5TGS1 186 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 SCARA3Q6AZY7 606 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 LAYNQ6UX15 382 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 SNX29Q8TEQ0 813 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 NAF1Q96HR8 494 aaKnown RBP9.79□□□□□ -0.84
SSBP1-212ENST00000489378 MSTO1Q9BUK6 570 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 MKRN2Q9H000 416 aaKnown RBP9.79□□□□□ -0.84
SSBP1-212ENST00000489378 ITM2CQ9NQX7 267 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 TBC1D14Q9P2M4 693 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 LRWD1Q9UFC0 647 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 DNM3Q9UQ16 869 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms