RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 CACUL1Q86Y37 369 aa12.31□□□□□ -0.44
HDAC6-233ENST00000489352 BICD1Q96G01 975 aa12.31□□□□□ -0.44
HDAC6-233ENST00000489352 MKRN2Q9H000 416 aaKnown RBP12.31□□□□□ -0.44
HDAC6-233ENST00000489352 C6orf106Q9H6K1 298 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-233ENST00000489352 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-233ENST00000489352 SLCO1B1Q9Y6L6 691 aa12.31□□□□□ -0.44
HDAC6-233ENST00000489352 STON1Q9Y6Q2 735 aa12.31□□□□□ -0.44
HDAC6-233ENST00000489352 POLQO75417 2590 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 KPNA7A9QM74 516 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 NEDD8-MDP1E9PL57 170 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 PIRO00625 290 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 SLC16A4O15374 487 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 NEMFO60524 1076 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 PPFIA2O75334 1257 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 FSBPO95073 299 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 CD27P26842 260 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 BCAT1P54687 386 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 MCL1Q07820 350 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 ST3GAL1Q11201 340 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 AAMPQ13685 434 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 TMEM132DQ14C87 1099 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 ARL13BQ3SXY8 428 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 SV2CQ496J9 727 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 KCNT1Q5JUK3 1230 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 JADE1Q6IE81 842 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 ZPBP2Q6X784 338 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 TAS1R3Q7RTX0 852 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 TMEM25Q86YD3 366 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 CD302Q8IX05 232 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 SAP25Q8TEE9 199 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 EXTL1Q92935 676 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 DEPDC7Q96QD5 511 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 ACBD6Q9BR61 282 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 ESYT1Q9BSJ8 1104 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 BHMT2Q9H2M3 363 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 ARHGAP28Q9P2N2 729 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 GTF3C4Q9UKN8 822 aa12.3□□□□□ -0.44
HDAC6-233ENST00000489352 ZNF840PA6NDX5 716 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 PRRT4C9JH25 899 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 GJB6O95452 261 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 IGLV3-19P01714 112 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 FAM87AP0C7U9 286 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 CPA1P15085 419 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 RPA1P27694 616 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 DGKGP49619 791 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 SMTNP53814 917 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 GRIN1Q05586 938 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 E2F5Q15329 346 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 LINC00303Q3SY05 128 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 CFAP221Q4G0U5 840 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 HS1BP3Q53T59 392 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 DENND5BQ6ZUT9 1274 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 UCMAQ8WVF2 138 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 BIRC7Q96CA5 298 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 AIFM3Q96NN9 605 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 CCNL2Q96S94 520 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-233ENST00000489352 SEMA3CQ99985 751 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 BBS2Q9BXC9 721 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 DDX43Q9NXZ2 648 aaKnown RBP12.29□□□□□ -0.44
HDAC6-233ENST00000489352 PLEKHB1Q9UF11 243 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-233ENST00000489352 KCNG1Q9UIX4 513 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 PLXNA2O75051 1894 aa12.29□□□□□ -0.44
HDAC6-233ENST00000489352 TULP1O00294 542 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-233ENST00000489352 NPC1O15118 1278 aa12.28□□□□□ -0.44
HDAC6-233ENST00000489352 VILLO15195 856 aa12.28□□□□□ -0.44
HDAC6-233ENST00000489352 HUS1O60921 280 aa12.28□□□□□ -0.44
HDAC6-233ENST00000489352 ITGB2P05107 769 aa12.28□□□□□ -0.44
HDAC6-233ENST00000489352 TYRP14679 529 aa12.28□□□□□ -0.44
HDAC6-233ENST00000489352 ACAT1P24752 427 aaKnown RBP12.28□□□□□ -0.44
HDAC6-233ENST00000489352 PDIA3P30101 505 aaKnown RBP12.28□□□□□ -0.44
HDAC6-233ENST00000489352 CDH8P55286 799 aa12.28□□□□□ -0.44
HDAC6-233ENST00000489352 DAB2P98082 770 aa12.28□□□□□ -0.44
HDAC6-233ENST00000489352 ENOX2Q16206 610 aaKnown RBP12.28□□□□□ -0.44
HDAC6-233ENST00000489352 TSGA10IPQ3SY00 556 aa12.28□□□□□ -0.44
HDAC6-233ENST00000489352 INTS6LQ5JSJ4 861 aaKnown RBP12.28□□□□□ -0.44
HDAC6-233ENST00000489352 C4orf50Q6ZRC1 276 aa12.28□□□□□ -0.44
HDAC6-233ENST00000489352 FUBP3Q96I24 572 aaKnown RBP eCLIP12.28□□□□□ -0.44
HDAC6-233ENST00000489352 SPATA17Q96L03 361 aa12.28□□□□□ -0.44
HDAC6-233ENST00000489352 SLITRK1Q96PX8 696 aa12.28□□□□□ -0.44
HDAC6-233ENST00000489352 GDF3Q9NR23 364 aa12.28□□□□□ -0.44
HDAC6-233ENST00000489352 WDR35Q9P2L0 1181 aa12.28□□□□□ -0.44
HDAC6-233ENST00000489352 MAGEC2Q9UBF1 373 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-233ENST00000489352 SSUH2Q9Y2M2 353 aa12.28□□□□□ -0.44
HDAC6-233ENST00000489352 HIP1RO75146 1068 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 SEMA4FO95754 770 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 ITGB6P18564 788 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 ACP1P24666 158 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 ELAVL4P26378 380 aaKnown RBP12.27□□□□□ -0.45
HDAC6-233ENST00000489352 ACSL1P33121 698 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 RACK1P63244 317 aaKnown RBP12.27□□□□□ -0.45
HDAC6-233ENST00000489352 ASIC1P78348 528 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 IGFBP7Q16270 282 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 TDRD10Q5VZ19 366 aaKnown RBP12.27□□□□□ -0.45
HDAC6-233ENST00000489352 BLOC1S2Q6QNY1 142 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 TPGS1Q6ZTW0 290 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 BBS7Q8IWZ6 715 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 RASEFQ8IZ41 740 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 ZNF560Q96MR9 790 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 CCSER1Q9C0I3 900 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 NACA2Q9H009 215 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms