RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 TFAP2BQ92481 460 aa26.29■■□□□ 1.8
HMGN1-217ENST00000489072 PCDHB4Q9Y5E5 795 aa26.29■■□□□ 1.8
HMGN1-217ENST00000489072 K7EQS6 105 aa26.28■■□□□ 1.8
HMGN1-217ENST00000489072 ATG13O75143 517 aa26.28■■□□□ 1.8
HMGN1-217ENST00000489072 FGFR1OPO95684 399 aaKnown RBP26.28■■□□□ 1.8
HMGN1-217ENST00000489072 PSEN1P49768 467 aa26.28■■□□□ 1.8
HMGN1-217ENST00000489072 C10orf120Q5SQS8 335 aa26.28■■□□□ 1.8
HMGN1-217ENST00000489072 HTR3DQ70Z44 454 aa26.28■■□□□ 1.8
HMGN1-217ENST00000489072 LONP2Q86WA8 852 aa26.28■■□□□ 1.8
HMGN1-217ENST00000489072 SFTPA1Q8IWL2 248 aa26.28■■□□□ 1.8
HMGN1-217ENST00000489072 DCLK2Q8N568 766 aa26.28■■□□□ 1.8
HMGN1-217ENST00000489072 CNOT6LQ96LI5 555 aaKnown RBP26.28■■□□□ 1.8
HMGN1-217ENST00000489072 ZSWIM1Q9BR11 485 aa26.28■■□□□ 1.8
HMGN1-217ENST00000489072 CLIC5Q9NZA1 410 aa26.28■■□□□ 1.8
HMGN1-217ENST00000489072 DNMT3LQ9UJW3 386 aa26.28■■□□□ 1.8
HMGN1-217ENST00000489072 EML5Q05BV3 1969 aa26.27■■□□□ 1.8
HMGN1-217ENST00000489072 XPO1O14980 1071 aaKnown RBP26.27■■□□□ 1.8
HMGN1-217ENST00000489072 HRO43593 1189 aa26.27■■□□□ 1.8
HMGN1-217ENST00000489072 CALCAP01258 141 aa26.27■■□□□ 1.8
HMGN1-217ENST00000489072 PAEPP09466 180 aa26.27■■□□□ 1.8
HMGN1-217ENST00000489072 TKTL1P51854 596 aa26.27■■□□□ 1.8
HMGN1-217ENST00000489072 SLC8A3P57103 927 aa26.27■■□□□ 1.8
HMGN1-217ENST00000489072 BST2Q10589 180 aaKnown RBP26.27■■□□□ 1.8
HMGN1-217ENST00000489072 SRSF5Q13243 272 aaKnown RBP26.27■■□□□ 1.8
HMGN1-217ENST00000489072 PKDCCQ504Y2 493 aa26.27■■□□□ 1.8
HMGN1-217ENST00000489072 IRF2BP1Q8IU81 584 aa26.27■■□□□ 1.8
HMGN1-217ENST00000489072 ZNF276Q8N554 614 aa26.27■■□□□ 1.8
HMGN1-217ENST00000489072 MLKLQ8NB16 471 aa26.27■■□□□ 1.8
HMGN1-217ENST00000489072 UBA3Q8TBC4 463 aa26.27■■□□□ 1.8
HMGN1-217ENST00000489072 RUBCNQ92622 972 aa26.27■■□□□ 1.8
HMGN1-217ENST00000489072 KREMEN1Q96MU8 473 aa26.27■■□□□ 1.8
HMGN1-217ENST00000489072 INTS2Q9H0H0 1204 aaKnown RBP26.27■■□□□ 1.8
HMGN1-217ENST00000489072 HESX1Q9UBX0 185 aa26.27■■□□□ 1.8
HMGN1-217ENST00000489072 KIAA1257Q9ULG3 409 aa26.27■■□□□ 1.8
HMGN1-217ENST00000489072 MYO18AQ92614 2054 aaKnown RBP26.26■■□□□ 1.79
HMGN1-217ENST00000489072 PXNP49023 591 aaPredicted RBP26.26■■□□□ 1.79
HMGN1-217ENST00000489072 GCNT1Q02742 428 aa26.26■■□□□ 1.79
HMGN1-217ENST00000489072 BHLHA9Q7RTU4 235 aa26.26■■□□□ 1.79
HMGN1-217ENST00000489072 TMEM25Q86YD3 366 aa26.26■■□□□ 1.79
HMGN1-217ENST00000489072 NDRG1Q92597 394 aaKnown RBP26.26■■□□□ 1.79
HMGN1-217ENST00000489072 ULBP1Q9BZM6 244 aa26.26■■□□□ 1.79
HMGN1-217ENST00000489072 SPHK2Q9NRA0 654 aa26.26■■□□□ 1.79
HMGN1-217ENST00000489072 SLC8A2Q9UPR5 921 aa26.26■■□□□ 1.79
HMGN1-217ENST00000489072 CEP250Q9BV73 2442 aa26.26■■□□□ 1.79
HMGN1-217ENST00000489072 SPAG17Q6Q759 2223 aa26.25■■□□□ 1.79
HMGN1-217ENST00000489072 SDK1Q7Z5N4 2213 aa26.25■■□□□ 1.79
HMGN1-217ENST00000489072 RALAP11233 206 aa26.25■■□□□ 1.79
HMGN1-217ENST00000489072 EIF2DP41214 584 aaKnown RBP26.25■■□□□ 1.79
HMGN1-217ENST00000489072 PLA2G4AP47712 749 aa26.25■■□□□ 1.79
HMGN1-217ENST00000489072 ZNF132P52740 706 aa26.25■■□□□ 1.79
HMGN1-217ENST00000489072 SEC13P55735 322 aa26.25■■□□□ 1.79
HMGN1-217ENST00000489072 GAD2Q05329 585 aa26.25■■□□□ 1.79
HMGN1-217ENST00000489072 PM20D1Q6GTS8 502 aa26.25■■□□□ 1.79
HMGN1-217ENST00000489072 LCLAT1Q6UWP7 414 aa26.25■■□□□ 1.79
HMGN1-217ENST00000489072 WDR5BQ86VZ2 330 aa26.25■■□□□ 1.79
HMGN1-217ENST00000489072 MIB1Q86YT6 1006 aa26.25■■□□□ 1.79
HMGN1-217ENST00000489072 RBBP8NLQ8NC74 664 aaPredicted RBP26.25■■□□□ 1.79
HMGN1-217ENST00000489072 USP33Q8TEY7 942 aa26.25■■□□□ 1.79
HMGN1-217ENST00000489072 PNKPQ96T60 521 aa26.25■■□□□ 1.79
HMGN1-217ENST00000489072 HINFPQ9BQA5 517 aa26.25■■□□□ 1.79
HMGN1-217ENST00000489072 LMBRD1Q9NUN5 540 aa26.25■■□□□ 1.79
HMGN1-217ENST00000489072 HOXC11O43248 304 aaPredicted RBP26.24■■□□□ 1.79
HMGN1-217ENST00000489072 ZBED1O96006 694 aa26.24■■□□□ 1.79
HMGN1-217ENST00000489072 CHRM1P11229 460 aaPredicted RBP26.24■■□□□ 1.79
HMGN1-217ENST00000489072 BRD2P25440 801 aaKnown RBP26.24■■□□□ 1.79
HMGN1-217ENST00000489072 YWHAGP61981 247 aaKnown RBP eCLIP26.24■■□□□ 1.79
HMGN1-217ENST00000489072 KDSRQ06136 332 aa26.24■■□□□ 1.79
HMGN1-217ENST00000489072 GOLGA8FQ08AF8 430 aa26.24■■□□□ 1.79
HMGN1-217ENST00000489072 GOLGA8DPQ0D2H9 430 aa26.24■■□□□ 1.79
HMGN1-217ENST00000489072 LPAL2Q16609 132 aa26.24■■□□□ 1.79
HMGN1-217ENST00000489072 Q6ZNB5 142 aa26.24■■□□□ 1.79
HMGN1-217ENST00000489072 SYT13Q7L8C5 426 aa26.24■■□□□ 1.79
HMGN1-217ENST00000489072 TADA2BQ86TJ2 420 aa26.24■■□□□ 1.79
HMGN1-217ENST00000489072 ETFBKMTQ8IXQ9 262 aa26.24■■□□□ 1.79
HMGN1-217ENST00000489072 PHTF2Q8N3S3 785 aa26.24■■□□□ 1.79
HMGN1-217ENST00000489072 HHIPQ96QV1 700 aa26.24■■□□□ 1.79
HMGN1-217ENST00000489072 LSM7Q9UK45 103 aaKnown RBP26.24■■□□□ 1.79
HMGN1-217ENST00000489072 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.24■■□□□ 1.79
HMGN1-217ENST00000489072 STC2O76061 302 aa26.23■■□□□ 1.79
HMGN1-217ENST00000489072 KAT7O95251 611 aa26.23■■□□□ 1.79
HMGN1-217ENST00000489072 SETSIPP0DME0 302 aa26.23■■□□□ 1.79
HMGN1-217ENST00000489072 ADIGQ0VDE8 80 aa26.23■■□□□ 1.79
HMGN1-217ENST00000489072 EFEMP1Q12805 493 aa26.23■■□□□ 1.79
HMGN1-217ENST00000489072 CNGA2Q16280 664 aa26.23■■□□□ 1.79
HMGN1-217ENST00000489072 DPCR1Q3MIW9 517 aa26.23■■□□□ 1.79
HMGN1-217ENST00000489072 C2orf27AQ580R0 203 aa26.23■■□□□ 1.79
HMGN1-217ENST00000489072 CREBRFQ8IUR6 639 aa26.23■■□□□ 1.79
HMGN1-217ENST00000489072 ARHGAP18Q8N392 663 aa26.23■■□□□ 1.79
HMGN1-217ENST00000489072 NAT16Q8N8M0 369 aa26.23■■□□□ 1.79
HMGN1-217ENST00000489072 ACDQ96AP0 544 aa26.23■■□□□ 1.79
HMGN1-217ENST00000489072 CDK5RAP1Q96SZ6 601 aaKnown RBP26.23■■□□□ 1.79
HMGN1-217ENST00000489072 CRACR2AQ9BSW2 395 aa26.23■■□□□ 1.79
HMGN1-217ENST00000489072 NUP62CLQ9H1M0 184 aa26.23■■□□□ 1.79
HMGN1-217ENST00000489072 LRRC4Q9HBW1 653 aa26.23■■□□□ 1.79
HMGN1-217ENST00000489072 ARHGEF4Q9NR80 690 aa26.23■■□□□ 1.79
HMGN1-217ENST00000489072 NCDNQ9UBB6 729 aa26.23■■□□□ 1.79
HMGN1-217ENST00000489072 RASAL2Q9UJF2 1139 aa26.23■■□□□ 1.79
HMGN1-217ENST00000489072 GABBR2O75899 941 aa26.22■■□□□ 1.79
HMGN1-217ENST00000489072 DMC1Q14565 340 aa26.22■■□□□ 1.79
HMGN1-217ENST00000489072 ANO4Q32M45 955 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms