RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 ARHGAP25P42331 645 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 STT3AP46977 705 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 LARS2Q15031 903 aaKnown RBP4.39□□□□□ -1.71
RFC4-213ENST00000489028 SEC23BQ15437 767 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 KIAA1614Q5VZ46 1190 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 SLC18B1Q6NT16 456 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 SLC2A7Q6PXP3 512 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 C1QL2Q7Z5L3 287 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 MBD3L2Q8NHZ7 208 aaPredicted RBP4.39□□□□□ -1.71
RFC4-213ENST00000489028 PNISRQ8TF01 805 aaKnown RBP4.39□□□□□ -1.71
RFC4-213ENST00000489028 PRR11Q96HE9 360 aaPredicted RBP4.39□□□□□ -1.71
RFC4-213ENST00000489028 ZC3H10Q96K80 434 aaKnown RBP4.39□□□□□ -1.71
RFC4-213ENST00000489028 SEMA4CQ9C0C4 833 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 SLC25A32Q9H2D1 315 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 SNX15Q9NRS6 342 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 KLHL13Q9P2N7 655 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 RNF7Q9UBF6 113 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 STEAP1Q9UHE8 339 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 AREL1O15033 823 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 TP73O15350 636 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 TMPRSS11DO60235 418 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 PRAMEF2O60811 474 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 CBFA2T3O75081 653 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 GCATO75600 419 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 USP1O94782 785 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 CDK4P11802 303 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 KELP23276 732 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 EIF4A1P60842 406 aaKnown RBP4.38□□□□□ -1.71
RFC4-213ENST00000489028 GPC5P78333 572 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 PMS2P11Q13670 270 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 KLF9Q13886 244 aaPredicted RBP4.38□□□□□ -1.71
RFC4-213ENST00000489028 CLCA4Q14CN2 919 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 ABLIM2Q6H8Q1 611 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 MZT2AQ6P582 158 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 KSR2Q6VAB6 950 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 KIAA0408Q6ZU52 694 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 CCAR1Q8IX12 1150 aaKnown RBP4.38□□□□□ -1.71
RFC4-213ENST00000489028 GALNT16Q8N428 558 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 ZNF398Q8TD17 642 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 ADAMTS18Q8TE60 1221 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 GDF15Q99988 308 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 EFHD1Q9BUP0 239 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 C1QTNF7Q9BXJ2 289 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 SLC29A3Q9BZD2 475 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 TFCP2L1Q9NZI6 479 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 NKX1-2Q9UD57 310 aaPredicted RBP4.38□□□□□ -1.71
RFC4-213ENST00000489028 ZNF804BA4D1E1 1349 aa4.38□□□□□ -1.71
RFC4-213ENST00000489028 BTBD19C9JJ37 291 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 UBE2Q2LH0YL09 131 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 H3BNC9 293 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 APOL1O14791 398 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 KCNQ3O43525 872 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 SNX2O60749 519 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 NDST3O95803 873 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 MBPP02686 304 aaPredicted RBP4.37□□□□□ -1.71
RFC4-213ENST00000489028 CD19P15391 556 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 ADRA1DP25100 572 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 LMO1P25800 156 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 MST1P26927 711 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 GABRB3P28472 473 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 PBX1P40424 430 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 TM4SF4P48230 202 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 ZNF81P51508 661 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 DAZAP2Q15038 168 aaPredicted RBP4.37□□□□□ -1.71
RFC4-213ENST00000489028 ACOX1Q15067 660 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 CERKLQ49MI3 558 aaPredicted RBP4.37□□□□□ -1.71
RFC4-213ENST00000489028 RAP1GAP2Q684P5 730 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 HIBCHQ6NVY1 386 aaPredicted RBP4.37□□□□□ -1.71
RFC4-213ENST00000489028 DCDC5Q6ZRR9 648 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 FSTL5Q8N475 847 aaPredicted RBP4.37□□□□□ -1.71
RFC4-213ENST00000489028 PNPLA1Q8N8W4 532 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 SUN3Q8TAQ9 357 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 PARD3BQ8TEW8 1205 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 CCDC17Q96LX7 622 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 FYTTD1Q96QD9 318 aaKnown RBP4.37□□□□□ -1.71
RFC4-213ENST00000489028 COLEC11Q9BWP8 271 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 SAP30LQ9HAJ7 183 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 VPS45Q9NRW7 570 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 GAR1Q9NY12 217 aaKnown RBP4.37□□□□□ -1.71
RFC4-213ENST00000489028 SCAF8Q9UPN6 1271 aaKnown RBP4.37□□□□□ -1.71
RFC4-213ENST00000489028 BTBD3Q9Y2F9 522 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 WDR17Q8IZU2 1322 aa4.37□□□□□ -1.71
RFC4-213ENST00000489028 TMEM232C9JQI7 657 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 BCAR3O75815 825 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 WDR47O94967 919 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 TMEM225BP0DP42 221 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 HARSP12081 509 aaKnown RBP4.36□□□□□ -1.71
RFC4-213ENST00000489028 MYL4P12829 197 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 PHKG2P15735 406 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 TNFSF4P23510 183 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 CFHR3Q02985 330 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 HNRNPA0Q13151 305 aaKnown RBP4.36□□□□□ -1.71
RFC4-213ENST00000489028 IFIT5Q13325 482 aaKnown RBP4.36□□□□□ -1.71
RFC4-213ENST00000489028 SLC14A1Q13336 389 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 KCNB1Q14721 858 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 ETFDHQ16134 617 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 ST3GAL2Q16842 350 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 LONRF1Q17RB8 773 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 AASDHQ4L235 1098 aaPredicted RBP4.36□□□□□ -1.71
RFC4-213ENST00000489028 ZNF425Q6IV72 752 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms