RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PLAUP00749 431 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 UQCRC1P31930 480 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 ARRB2P32121 409 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 TIRAPP58753 221 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 KEAP1Q14145 624 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 KPNB1Q14974 876 aaKnown RBP3.39□□□□□ -1.87
CCDC93-209ENST00000488908 ZNF783Q6ZMS7 281 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 CATIPQ7Z7H3 387 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 TMEM199Q8N511 208 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 DNAJB14Q8TBM8 379 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 MIB2Q96AX9 1013 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 MVB12AQ96EY5 273 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 EDC3Q96F86 508 aaKnown RBP3.39□□□□□ -1.87
CCDC93-209ENST00000488908 TRMT61AQ96FX7 289 aaKnown RBP3.39□□□□□ -1.87
CCDC93-209ENST00000488908 WDYHV1Q96HA8 205 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 MRGPRX1Q96LB2 322 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 P2RX7Q99572 595 aaKnown RBP3.39□□□□□ -1.87
CCDC93-209ENST00000488908 NUAK2Q9H093 628 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 ARL8BQ9NVJ2 186 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 PCDHA12Q9UN75 941 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 STXBP5LQ9Y2K9 1186 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 TNKSO95271 1327 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 F8W810 466 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 SRGAP2O75044 1071 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 KATNA1O75449 491 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 HOXB2P14652 356 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 POLD2P49005 469 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 SLC12A2P55011 1212 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 P2RX3P56373 397 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 RPL36AP83881 106 aaKnown RBP3.38□□□□□ -1.87
CCDC93-209ENST00000488908 TRAPPC11Q7Z392 1133 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 MPP5Q8N3R9 675 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 SLC44A5Q8NCS7 719 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 NEUROG1Q92886 237 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 KAZALD1Q96I82 304 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 TM2D2Q9BX73 214 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 GTPBP4Q9BZE4 634 aaKnown RBP3.38□□□□□ -1.87
CCDC93-209ENST00000488908 TRIM5Q9C035 493 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 RBM38Q9H0Z9 239 aaKnown RBP3.38□□□□□ -1.87
CCDC93-209ENST00000488908 ARMT1Q9H993 441 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 MSRB1Q9NZV6 116 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 PCDHA7Q9UN72 937 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 CDY1Q9Y6F8 540 aa3.38□□□□□ -1.87
CCDC93-209ENST00000488908 EXOC5O00471 708 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 LINC01565O15544 149 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 RGS10O43665 173 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 SNUPNO95149 360 aaKnown RBP3.37□□□□□ -1.87
CCDC93-209ENST00000488908 ENTPD1P49961 510 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 GAS1P54826 345 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 RRP1P56182 461 aaKnown RBP3.37□□□□□ -1.87
CCDC93-209ENST00000488908 TIAL1Q01085 375 aaKnown RBP eCLIP3.37□□□□□ -1.87
CCDC93-209ENST00000488908 LTBQ06643 244 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 CTBP1Q13363 440 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 PTGR1Q14914 329 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 GIMAP6Q6P9H5 292 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 ZNF329Q86UD4 541 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 PNPLA1Q8N8W4 532 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 WFIKKN2Q8TEU8 576 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 KBTBD7Q8WVZ9 684 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 FCRL5Q96RD9 977 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 USP29Q9HBJ7 922 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 CD93Q9NPY3 652 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 FZD4Q9ULV1 537 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 SPEF1Q9Y4P9 236 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 SIRT4Q9Y6E7 314 aaPredicted RBP3.37□□□□□ -1.87
CCDC93-209ENST00000488908 EVPLQ92817 2033 aa3.37□□□□□ -1.87
CCDC93-209ENST00000488908 A8MVJ9 347 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 BTN3A1O00481 513 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 RRHO14718 337 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 GRID2O43424 1007 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 CAMTA2O94983 1202 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 RASAL1O95294 804 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 IL33O95760 270 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 CD19P15391 556 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 MCM5P33992 734 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 MLH1P40692 756 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 GPC5P78333 572 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 RAB32Q13637 225 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 FGL2Q14314 439 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 INSCQ1MX18 579 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 CACHD1Q5VU97 1274 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 OR6B3Q8NGW1 331 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 PLBD2Q8NHP8 589 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 PIGKQ92643 395 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 SLITRK1Q96PX8 696 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 PPP1R9BQ96SB3 815 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 SF3B5Q9BWJ5 86 aaKnown RBP3.36□□□□□ -1.87
CCDC93-209ENST00000488908 TRIM54Q9BYV2 358 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 FZD3Q9NPG1 666 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 XPNPEP3Q9NQH7 507 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 PAPOLBQ9NRJ5 636 aaKnown RBP3.36□□□□□ -1.87
CCDC93-209ENST00000488908 NKX1-2Q9UD57 310 aaPredicted RBP3.36□□□□□ -1.87
CCDC93-209ENST00000488908 ANAPC4Q9UJX5 808 aa3.36□□□□□ -1.87
CCDC93-209ENST00000488908 SLC22A23A1A5C7 686 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 TNFRSF13BO14836 293 aaPredicted RBP3.35□□□□□ -1.87
CCDC93-209ENST00000488908 CD3EAPO15446 510 aaKnown RBP3.35□□□□□ -1.87
CCDC93-209ENST00000488908 ALDH2P05091 517 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 CDK11BP21127 795 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms