RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 CYP1A2P05177 515 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 FGD3Q5JSP0 725 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 ADGRD1Q6QNK2 874 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 CHST15Q7LFX5 561 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-229ENST00000488765 ZNF713Q8N859 430 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-229ENST00000488765 SEMA4DQ92854 862 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 PPP1R14BQ96C90 147 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 PGBD4Q96DM1 585 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 PKP2Q99959 881 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 ZNF287Q9HBT7 754 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 ATAD3AQ9NVI7 634 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 PNPOQ9NVS9 261 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 PKD2L1Q9P0L9 805 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 SLC24A2Q9UI40 661 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 POU2F3Q9UKI9 436 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 FZD1Q9UP38 647 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 CORINQ9Y5Q5 1042 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 PLOD2O00469 737 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 MAP3K6O95382 1288 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 EIF2AK2P19525 551 aaKnown RBP16.76■□□□□ 0.27
MCF2L-229ENST00000488765 HOXA13P31271 388 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-229ENST00000488765 PHBP35232 272 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 SERPINB5P36952 375 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 SMTNL2Q2TAL5 461 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 ANO4Q32M45 955 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 KRT80Q6KB66 452 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 IRGQQ8WZA9 623 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 C12orf43Q96C57 262 aaKnown RBP16.76■□□□□ 0.27
MCF2L-229ENST00000488765 MAML3Q96JK9 1138 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 NT5C1BQ96P26 610 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 ARPC5LQ9BPX5 153 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 DNAJB4Q9UDY4 337 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 TMED5Q9Y3A6 229 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 C1orf232A0A0U1RR37 186 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 ATE1O95260 518 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 CD48P09326 243 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 PSMC3P17980 439 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 EPHA3P29320 983 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 STX3Q13277 289 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 KLF1Q13351 362 aaPredicted RBP16.75■□□□□ 0.27
MCF2L-229ENST00000488765 GPR107Q5VW38 600 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 CEP44Q9C0F1 390 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 PDGFDQ9GZP0 370 aaPredicted RBP16.75■□□□□ 0.27
MCF2L-229ENST00000488765 CROTQ9UKG9 612 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 GOLGA8QA0A0J9YX86 632 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 GOLGA8OA6NCC3 632 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 GOLGA8NF8WBI6 632 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 KDM1AO60341 852 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 SIN3BO75182 1162 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 S100BP04271 92 aaPredicted RBP16.75■□□□□ 0.27
MCF2L-229ENST00000488765 ITGAXP20702 1163 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 MAN1A1P33908 653 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 ELK3P41970 407 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 SLC1A1P43005 524 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 HADHBP55084 474 aaKnown RBP16.75■□□□□ 0.27
MCF2L-229ENST00000488765 RPL10AP62906 217 aaKnown RBP16.75■□□□□ 0.27
MCF2L-229ENST00000488765 NME3Q13232 169 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 PPP1R18Q6NYC8 613 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 FOXR2Q6PJQ5 311 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 SYDE1Q6ZW31 735 aaPredicted RBP16.75■□□□□ 0.27
MCF2L-229ENST00000488765 MZB1Q8WU39 189 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 ATP6V0A1Q93050 837 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 EME1Q96AY2 570 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 CEP295NLQ96MC4 621 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 ZMAT2Q96NC0 199 aaKnown RBP16.75■□□□□ 0.27
MCF2L-229ENST00000488765 LIASO43766 372 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 KCNT1Q5JUK3 1230 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 FAXCQ5TGI0 409 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 TFB1MQ8WVM0 346 aaKnown RBP16.75■□□□□ 0.27
MCF2L-229ENST00000488765 MKL1Q969V6 931 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 HERC2P3Q9BVR0 1158 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 ANO3Q9BYT9 981 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 JMJD4Q9H9V9 463 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 TBCCD1Q9NVR7 557 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 EPS15L1Q9UBC2 864 aa16.75■□□□□ 0.27
MCF2L-229ENST00000488765 APOBEC2Q9Y235 224 aaKnown RBP16.75■□□□□ 0.27
MCF2L-229ENST00000488765 CLRN2A0PK11 232 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 TESPA1A2RU30 521 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-229ENST00000488765 CXorf49A8MYA2 514 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-229ENST00000488765 SLC18A1P54219 525 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 NFX1Q12986 1120 aaKnown RBP16.74■□□□□ 0.27
MCF2L-229ENST00000488765 PPM1LQ5SGD2 360 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 RARS2Q5T160 578 aaKnown RBP16.74■□□□□ 0.27
MCF2L-229ENST00000488765 RNASEH2BQ5TBB1 312 aaKnown RBP16.74■□□□□ 0.27
MCF2L-229ENST00000488765 KYAT3Q6YP21 454 aaKnown RBP16.74■□□□□ 0.27
MCF2L-229ENST00000488765 MIER3Q7Z3K6 550 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 APOPT1Q96IL0 206 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 MPHOSPH6Q99547 160 aaKnown RBP16.74■□□□□ 0.27
MCF2L-229ENST00000488765 TMEM79Q9BSE2 394 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 KLHL25Q9H0H3 589 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 GPRC5CQ9NQ84 441 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 KIAA1522Q9P206 1035 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-229ENST00000488765 SERPINB13Q9UIV8 391 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 LTBP4Q8N2S1 1624 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 F5H423 210 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-229ENST00000488765 TGDSO95455 350 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 CLIC3O95833 236 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 MZF1P28698 734 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-229ENST00000488765 VAMP7P51809 220 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 STAT2P52630 851 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms