RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 DEUP1Q05D60 604 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 ITIH3Q06033 890 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 SMARCB1Q12824 385 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 DUSP4Q13115 394 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 NME3Q13232 169 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 KRT81Q14533 505 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 ACAP1Q15027 740 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 ATP13A4Q4VNC1 1196 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 C9orf50Q5SZB4 431 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 BTBD8Q5XKL5 378 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 MFSD7Q6UXD7 560 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 SPOCD1Q6ZMY3 1216 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 DENND5BQ6ZUT9 1274 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 CYP4V2Q6ZWL3 525 aaPredicted RBP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 ARCQ7LC44 396 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 STRADAQ7RTN6 431 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 BHLHA9Q7RTU4 235 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 TAC4Q86UU9 113 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 FAM131BQ86XD5 332 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 NUP93Q8N1F7 819 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 CCDC185Q8N715 623 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 KLHL23Q8NBE8 558 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 SP7Q8TDD2 431 aaPredicted RBP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 DQX1Q8TE96 717 aaKnown RBP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 EDEM1Q92611 657 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 KHSRPQ92945 711 aaKnown RBP eCLIP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 KRT12Q99456 494 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 RAD9AQ99638 391 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 DDX23Q9BUQ8 820 aaKnown RBP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 SNRNP25Q9BV90 132 aaKnown RBP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 TRIM62Q9BVG3 475 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 HEMGNQ9BXL5 484 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 CALN1Q9BXU9 219 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 ADAM33Q9BZ11 813 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 DDX47Q9H0S4 455 aaKnown RBP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 ZBP1Q9H171 429 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 EPC1Q9H2F5 836 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 PLEKHA4Q9H4M7 779 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 ENTPD7Q9NQZ7 604 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 MRPL17Q9NRX2 175 aaKnown RBP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 GMIPQ9P107 970 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 MTUS1Q9ULD2 1270 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 TTC7AQ9ULT0 858 aaPredicted RBP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 NAALADL1Q9UQQ1 740 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 YIPF1Q9Y548 306 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 SHROOM3Q8TF72 1996 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 hCG_1818297A0A087WSY0 165 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 TCRBV7S2A1N4TA0A589 114 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 LINC01553A4QN01 128 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 GRXCR1A8MXD5 290 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 M0QYT0 321 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 PRRG1O14668 218 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 TNFRSF10BO14763 440 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 PHF2O75151 1096 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 RTN3O95197 1032 aaPredicted RBP7.21□□□□□ -1.26
PDAP1-203ENST00000488214 ZRANB2O95218 330 aaKnown RBP eCLIP7.21□□□□□ -1.26
PDAP1-203ENST00000488214 KRT10P13645 584 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 MYOGP15173 224 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 CDKN2BP42772 138 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 CREMQ03060 361 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 MTMR3Q13615 1198 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 PPP2R5EQ16537 467 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 SLC25A52Q3SY17 297 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 ZC3H12AQ5D1E8 599 aaKnown RBP7.21□□□□□ -1.26
PDAP1-203ENST00000488214 TFDP3Q5H9I0 405 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 PPP6R3Q5H9R7 873 aaPredicted RBP7.21□□□□□ -1.26
PDAP1-203ENST00000488214 COL13A1Q5TAT6 717 aaPredicted RBP7.21□□□□□ -1.26
PDAP1-203ENST00000488214 SYPL2Q5VXT5 272 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 PLPP4Q5VZY2 271 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 BSPRYQ5W0U4 402 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 PM20D1Q6GTS8 502 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 FAM109BQ6ICB4 259 aaPredicted RBP7.21□□□□□ -1.26
PDAP1-203ENST00000488214 ANKS1BQ7Z6G8 1248 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 RFX6Q8HWS3 928 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 RCOR2Q8IZ40 523 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 SCML4Q8N228 414 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 MMGT1Q8N4V1 131 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 KCTD6Q8NC69 237 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 PHOSPHO2Q8TCD6 241 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.21□□□□□ -1.26
PDAP1-203ENST00000488214 GIPC2Q8TF65 315 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 TEKT4Q8WW24 435 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 ATG4AQ8WYN0 398 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 RAPGEF5Q92565 580 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 CLP1Q92989 425 aaKnown RBP7.21□□□□□ -1.26
PDAP1-203ENST00000488214 HAUS1Q96CS2 278 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 NPY6RQ99463 290 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 NCAPGQ9BPX3 1015 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 CLSTN3Q9BQT9 956 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 HERPUD2Q9BSE4 406 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 C11orf84Q9BUA3 381 aaPredicted RBP7.21□□□□□ -1.26
PDAP1-203ENST00000488214 OSBPL8Q9BZF1 889 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 FBXO44Q9H4M3 255 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 ANKZF1Q9H8Y5 726 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 CYP4F11Q9HBI6 524 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.21□□□□□ -1.26
PDAP1-203ENST00000488214 PIGVQ9NUD9 493 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 DDIT4Q9NX09 232 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 CALCOCO1Q9P1Z2 691 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 STK39Q9UEW8 545 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms