RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 PRKCIP41743 596 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 RPL34P49207 117 aaKnown RBP16.49■□□□□ 0.23
C9orf3-219ENST00000488186 ADKP55263 362 aaKnown RBP16.49■□□□□ 0.23
C9orf3-219ENST00000488186 NOMO3P69849 1222 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 TDGQ13569 410 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 CLEC16AQ2KHT3 1053 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 EFHC1Q5JVL4 640 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 POTEHQ6S545 545 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 TOGARAM2Q6ZUX3 1019 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 SCD5Q86SK9 330 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 DDX42Q86XP3 938 aaKnown RBP eCLIP16.49■□□□□ 0.23
C9orf3-219ENST00000488186 ZDHHC17Q8IUH5 632 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 UBALD2Q8IYN6 164 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 SLC30A5Q8TAD4 765 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 CLEC4CQ8WTT0 213 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 EDEM1Q92611 657 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 SLC22A12Q96S37 553 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 OLA1Q9NTK5 396 aaKnown RBP16.49■□□□□ 0.23
C9orf3-219ENST00000488186 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.49■□□□□ 0.23
C9orf3-219ENST00000488186 SMPD4Q9NXE4 827 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 DNMT3LQ9UJW3 386 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 NUDT5Q9UKK9 219 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 SORCS3Q9UPU3 1222 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 CPQQ9Y646 472 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 ZNF638Q14966 1978 aaKnown RBP16.49■□□□□ 0.23
C9orf3-219ENST00000488186 TMCO5BA8MYB1 307 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 GOLGA6L6A8MZA4 724 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 PAPSS1O43252 624 aaPredicted RBP16.48■□□□□ 0.23
C9orf3-219ENST00000488186 GABBR2O75899 941 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 TBX18O95935 607 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 ERBB2P04626 1255 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 NCAM1P13591 858 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 PGFP49763 221 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 SLC7A9P82251 487 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 SLC6A3Q01959 620 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 EFEMP1Q12805 493 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 ZNF268Q14587 947 aaPredicted RBP16.48■□□□□ 0.23
C9orf3-219ENST00000488186 PTPN20Q4JDL3 420 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 FAM183BPQ6ZVS7 135 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 ZNF571Q7Z3V5 609 aaPredicted RBP16.48■□□□□ 0.23
C9orf3-219ENST00000488186 MFSD6LQ8IWD5 586 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 SLC44A3Q8N4M1 653 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 BPIFB1Q8TDL5 484 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 SH3RF2Q8TEC5 729 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 DEPDC1BQ8WUY9 529 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 USP13Q92995 863 aaPredicted RBP16.48■□□□□ 0.23
C9orf3-219ENST00000488186 PCDHB18PQ96TA0 734 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 RPP25Q9BUL9 199 aaKnown RBP16.48■□□□□ 0.23
C9orf3-219ENST00000488186 TRMT61BQ9BVS5 477 aaKnown RBP16.48■□□□□ 0.23
C9orf3-219ENST00000488186 DEF6Q9H4E7 631 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 OSER1Q9NX31 292 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 OBP2AQ9NY56 170 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 ADAM22Q9P0K1 906 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 RASAL2Q9UJF2 1139 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 ARHGAP26Q9UNA1 814 aa16.48■□□□□ 0.23
C9orf3-219ENST00000488186 PATJQ8NI35 1801 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 ZNF263O14978 683 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 MFAP3LO75121 409 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 PRAMEF12O95522 483 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 CALB1P05937 261 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 UNGP13051 313 aaPredicted RBP16.47■□□□□ 0.23
C9orf3-219ENST00000488186 PSMC3P17980 439 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 RNASE9P60153 205 aaKnown RBP16.47■□□□□ 0.23
C9orf3-219ENST00000488186 YWHAZP63104 245 aaKnown RBP16.47■□□□□ 0.23
C9orf3-219ENST00000488186 GRM2Q14416 872 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 E4F1Q66K89 784 aaPredicted RBP16.47■□□□□ 0.23
C9orf3-219ENST00000488186 ACAD10Q6JQN1 1059 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 MMS22LQ6ZRQ5 1243 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 HFE2Q6ZVN8 426 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 MIB1Q86YT6 1006 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 ZNF276Q8N554 614 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 EDAQ92838 391 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 C1QTNF1Q9BXJ1 281 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 PLA2G2FQ9BZM2 168 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 BRD9Q9H8M2 597 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 POPDC2Q9HBU9 364 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 ABHD10Q9NUJ1 306 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 MARCH2Q9P0N8 246 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 TJP2Q9UDY2 1190 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 CCL26Q9Y258 94 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 SH3BP1Q9Y3L3 701 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 TECTAO75443 2155 aa16.47■□□□□ 0.23
C9orf3-219ENST00000488186 GOLGA8SH3BPF8 625 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 LEFTY2O00292 366 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 MDM4O15151 490 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 HSF2BPO75031 334 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 GLI1P08151 1106 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 IRF1P10914 325 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 FCARP24071 287 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 GDI1P31150 447 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 GABRB2P47870 512 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 COG7P83436 770 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 CENPCQ03188 943 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 TBX2Q13207 712 aaPredicted RBP16.46■□□□□ 0.23
C9orf3-219ENST00000488186 C2CD6Q53TS8 623 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 FAM102AQ5T9C2 384 aaPredicted RBP16.46■□□□□ 0.23
C9orf3-219ENST00000488186 KLHDC10Q6PID8 442 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 VITQ6UXI7 678 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 DNAJC7Q99615 494 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 C11orf70Q9BRQ4 267 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms