RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TBC1D14Q9P2M4 693 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 EBF1Q9UH73 591 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 MAN1B1Q9UKM7 699 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 SH3BP1Q9Y3L3 701 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 USP3Q9Y6I4 520 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 SPEGQ15772 3267 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 AXIN1O15169 862 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 ADAM23O75077 832 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 KAT7O95251 611 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 SMC2O95347 1197 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 CCDC192P0DO97 292 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 FKBP3Q00688 224 aaKnown RBP11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TCERG1LQ5VWI1 586 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 ARHGAP17Q68EM7 881 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 KLHDC10Q6PID8 442 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TMEM92Q6UXU6 159 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 Q6ZNB5 142 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 BHLHA9Q7RTU4 235 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TTC30AQ86WT1 665 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 ALLCQ8N6M5 410 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 IL17RCQ8NAC3 791 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 CCDC150Q8NCX0 1101 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 ZC3H10Q96K80 434 aaKnown RBP11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 PNKPQ96T60 521 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TSG101Q99816 390 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 DUSP16Q9BY84 665 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 DUSP15Q9H1R2 295 aaPredicted RBP11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 FAM124BQ9H5Z6 455 aaPredicted RBP11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 ARHGEF4Q9NR80 690 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 SPHK2Q9NRA0 654 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 NUDT5Q9UKK9 219 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 CDV3Q9UKY7 258 aaKnown RBP11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 HCN2Q9UL51 889 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 EPG5Q9HCE0 2579 aa11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 CNOT1A5YKK6 2376 aaKnown RBP11.82□□□□□ -0.52
RAB11FIP3-210ENST00000487899 KMT2BQ9UMN6 2715 aaPredicted RBP11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 A0A0A0MRY4 1105 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 GOLGA6L4A6NEF3 574 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 PRR5-ARHGAP8B1AHC4 643 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 SGK1O00141 431 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TULP2O00295 520 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 DCLK1O15075 740 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TRIM24O15164 1050 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 CACNG3O60359 315 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 GDF9O60383 454 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 STX10O60499 249 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TULP3O75386 442 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TRIM21P19474 475 aaKnown RBP11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 ATXN1P54253 815 aaKnown RBP11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 MRPS21P82921 87 aaKnown RBP11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 ARHGAP8P85298 464 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 CUL2Q13617 745 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 CCDC6Q16204 474 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 CRY1Q16526 586 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 PLK5Q496M5 336 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 RAB41Q5JT25 222 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 PLA2G2CQ5R387 149 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 ANO7Q6IWH7 933 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TTI2Q6NXR4 508 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 HTR3DQ70Z44 454 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 CACNA2D4Q7Z3S7 1137 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TMEM25Q86YD3 366 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 CCDC33Q8N5R6 958 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TERB1Q8NA31 727 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TSTD1Q8NFU3 115 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TMEM176AQ96HP8 235 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 LOXL4Q96JB6 756 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 CNOT6LQ96LI5 555 aaKnown RBP11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TPSD1Q9BZJ3 242 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 NACA2Q9H009 215 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 MARK1Q9P0L2 795 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 ARMCX3Q9UH62 379 aaPredicted RBP11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 NAGPAQ9UK23 515 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 ASPMQ8IZT6 3477 aa11.81□□□□□ -0.52
RAB11FIP3-210ENST00000487899 CHD8Q9HCK8 2581 aa11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 PSMA7O14818 248 aa11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 GADD45BO75293 160 aaPredicted RBP11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 STC2O76061 302 aa11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 KLF8O95600 359 aaPredicted RBP11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 APODP05090 189 aa11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 RARGP13631 454 aa11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 BCKDHBP21953 392 aa11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TIE1P35590 1138 aa11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 ATP5C1P36542 298 aaKnown RBP11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 GRIA2P42262 883 aa11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 FMO5P49326 533 aa11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 GAD2Q05329 585 aa11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 SF3A2Q15428 464 aaKnown RBP11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 GOLGA7BQ2TAP0 167 aa11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 PMS2CLQ68D20 193 aa11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 PIGZQ86VD9 579 aa11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 MIB1Q86YT6 1006 aa11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 ELOA2Q8IYF1 753 aaPredicted RBP11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 ZNF276Q8N554 614 aa11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TTC39CQ8N584 583 aa11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 NAT16Q8N8M0 369 aa11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TXNDC5Q8NBS9 432 aaKnown RBP11.8□□□□□ -0.52
RAB11FIP3-210ENST00000487899 CCDC26Q8TAB7 109 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms