RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 POT1Q9NUX5 634 aa4.82□□□□□ -1.64
CCDC66-221ENST00000487739 TMEM184CQ9NVA4 438 aa4.82□□□□□ -1.64
CCDC66-221ENST00000487739 ZNF580Q9UK33 172 aa4.82□□□□□ -1.64
CCDC66-221ENST00000487739 RIMKLBQ9ULI2 386 aa4.82□□□□□ -1.64
CCDC66-221ENST00000487739 L1RE1Q9UN81 338 aa4.82□□□□□ -1.64
CCDC66-221ENST00000487739 RAB27BO00194 218 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 CLIC1O00299 241 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 CNOT3O75175 753 aaKnown RBP4.81□□□□□ -1.64
CCDC66-221ENST00000487739 PARP1P09874 1014 aaKnown RBP4.81□□□□□ -1.64
CCDC66-221ENST00000487739 CTSAP10619 480 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 ZKSCAN1P17029 563 aaPredicted RBP4.81□□□□□ -1.64
CCDC66-221ENST00000487739 ADRA1DP25100 572 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 MCM5P33992 734 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 CPT1AP50416 773 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 HSF1Q00613 529 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 STK3Q13188 491 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 CNGA2Q16280 664 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 SLC9C1Q4G0N8 1177 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 KLHL22Q53GT1 634 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 C3orf38Q5JPI3 329 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 RUSC1-AS1Q66K80 236 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 YAF2Q8IY57 180 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 WASF1Q92558 559 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 EDC3Q96F86 508 aaKnown RBP4.81□□□□□ -1.64
CCDC66-221ENST00000487739 VPS50Q96JG6 964 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 FAM204AQ9H8W3 233 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 C1orf112Q9NSG2 853 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 HEY2Q9UBP5 337 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 RGS17Q9UGC6 210 aaPredicted RBP4.81□□□□□ -1.64
CCDC66-221ENST00000487739 STEAP1Q9UHE8 339 aa4.81□□□□□ -1.64
CCDC66-221ENST00000487739 IGKV2D-30A0A075B6S6 120 aa4.8□□□□□ -1.64
CCDC66-221ENST00000487739 AGPSO00116 658 aa4.8□□□□□ -1.64
CCDC66-221ENST00000487739 INMTO95050 263 aa4.8□□□□□ -1.64
CCDC66-221ENST00000487739 TXNP10599 105 aaKnown RBP4.8□□□□□ -1.64
CCDC66-221ENST00000487739 TPH1P17752 444 aa4.8□□□□□ -1.64
CCDC66-221ENST00000487739 TACR3P29371 465 aa4.8□□□□□ -1.64
CCDC66-221ENST00000487739 CCKARP32238 428 aa4.8□□□□□ -1.64
CCDC66-221ENST00000487739 ME1P48163 572 aa4.8□□□□□ -1.64
CCDC66-221ENST00000487739 CACNB3P54284 484 aa4.8□□□□□ -1.64
CCDC66-221ENST00000487739 RPS16P62249 146 aaKnown RBP4.8□□□□□ -1.64
CCDC66-221ENST00000487739 TXNL4AP83876 142 aaKnown RBP4.8□□□□□ -1.64
CCDC66-221ENST00000487739 SLC14A1Q13336 389 aa4.8□□□□□ -1.64
CCDC66-221ENST00000487739 MINDY4Q4G0A6 757 aa4.8□□□□□ -1.64
CCDC66-221ENST00000487739 ARFGAP1Q8N6T3 406 aa4.8□□□□□ -1.64
CCDC66-221ENST00000487739 TRMOQ9BU70 441 aa4.8□□□□□ -1.64
CCDC66-221ENST00000487739 BRIP1Q9BX63 1249 aa4.8□□□□□ -1.64
CCDC66-221ENST00000487739 MID2Q9UJV3 735 aa4.8□□□□□ -1.64
CCDC66-221ENST00000487739 OGDHLQ9ULD0 1010 aa4.8□□□□□ -1.64
CCDC66-221ENST00000487739 HS3ST3B1Q9Y662 390 aa4.8□□□□□ -1.64
CCDC66-221ENST00000487739 CD8B2A6NJW9 211 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 H3BNX3 289 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 PRPF3O43395 683 aaKnown RBP4.79□□□□□ -1.64
CCDC66-221ENST00000487739 SNX2O60749 519 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 DEUP1Q05D60 604 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 PFKFB3Q16875 520 aaPredicted RBP4.79□□□□□ -1.64
CCDC66-221ENST00000487739 LEXMQ3ZCV2 418 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 MZT2AQ6P582 158 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 USP49Q70CQ1 688 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 PIM3Q86V86 326 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.79□□□□□ -1.64
CCDC66-221ENST00000487739 METTL25Q8N6Q8 603 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 C11orf44Q8N8P7 122 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 IPCEF1Q8WWN9 437 aaPredicted RBP4.79□□□□□ -1.64
CCDC66-221ENST00000487739 ZFYVE19Q96K21 471 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 HIST1H2AAQ96QV6 131 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 ADGRE3Q9BY15 652 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 LRRC27Q9C0I9 530 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 USP29Q9HBJ7 922 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 COL20A1Q9P218 1284 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 DNAJB11Q9UBS4 358 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 ASAP1Q9ULH1 1129 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 FZD4Q9ULV1 537 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 SQORQ9Y6N5 450 aa4.79□□□□□ -1.64
CCDC66-221ENST00000487739 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.78□□□□□ -1.64
CCDC66-221ENST00000487739 FYB1O15117 783 aa4.78□□□□□ -1.64
CCDC66-221ENST00000487739 PSG1P11464 419 aa4.78□□□□□ -1.64
CCDC66-221ENST00000487739 IL1R1P14778 569 aa4.78□□□□□ -1.64
CCDC66-221ENST00000487739 RBL1P28749 1068 aa4.78□□□□□ -1.64
CCDC66-221ENST00000487739 EIF4A1P60842 406 aaKnown RBP4.78□□□□□ -1.64
CCDC66-221ENST00000487739 YPEL5P62699 121 aa4.78□□□□□ -1.64
CCDC66-221ENST00000487739 GPC5P78333 572 aa4.78□□□□□ -1.64
CCDC66-221ENST00000487739 FMO1Q01740 532 aa4.78□□□□□ -1.64
CCDC66-221ENST00000487739 CLCA4Q14CN2 919 aa4.78□□□□□ -1.64
CCDC66-221ENST00000487739 MIDNQ504T8 468 aa4.78□□□□□ -1.64
CCDC66-221ENST00000487739 ODR4Q5SWX8 454 aa4.78□□□□□ -1.64
CCDC66-221ENST00000487739 FAM102BQ5T8I3 360 aa4.78□□□□□ -1.64
CCDC66-221ENST00000487739 UBE2Q1Q7Z7E8 422 aa4.78□□□□□ -1.64
CCDC66-221ENST00000487739 ZNF548Q8NEK5 533 aaPredicted RBP4.78□□□□□ -1.64
CCDC66-221ENST00000487739 MPLKIPQ8TAP9 179 aa4.78□□□□□ -1.64
CCDC66-221ENST00000487739 LRTOMTQ8WZ04 291 aa4.78□□□□□ -1.64
CCDC66-221ENST00000487739 KAZALD1Q96I82 304 aa4.78□□□□□ -1.64
CCDC66-221ENST00000487739 MARK4Q96L34 752 aa4.78□□□□□ -1.64
CCDC66-221ENST00000487739 CHST8Q9H2A9 424 aa4.78□□□□□ -1.64
CCDC66-221ENST00000487739 DKK4Q9UBT3 224 aa4.78□□□□□ -1.64
CCDC66-221ENST00000487739 NOB1Q9ULX3 412 aaKnown RBP4.78□□□□□ -1.64
CCDC66-221ENST00000487739 CNTNAP2Q9UHC6 1331 aa4.77□□□□□ -1.65
CCDC66-221ENST00000487739 INPPL1O15357 1258 aa4.77□□□□□ -1.65
CCDC66-221ENST00000487739 TULP3O75386 442 aa4.77□□□□□ -1.65
CCDC66-221ENST00000487739 TOMM40O96008 361 aa4.77□□□□□ -1.65
CCDC66-221ENST00000487739 CRYABP02511 175 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms