RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PITX1P78337 314 aaPredicted RBP9.85□□□□□ -0.83
SF3B1-211ENST00000487698 SNX1Q13596 522 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 PDK2Q15119 407 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 NFE2Q16621 373 aaPredicted RBP9.85□□□□□ -0.83
SF3B1-211ENST00000487698 DCAF6Q58WW2 860 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 SYPL2Q5VXT5 272 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 ZNF280DQ6N043 979 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 SYDE1Q6ZW31 735 aaPredicted RBP9.85□□□□□ -0.83
SF3B1-211ENST00000487698 RNF168Q8IYW5 571 aaPredicted RBP9.85□□□□□ -0.83
SF3B1-211ENST00000487698 KCTD6Q8NC69 237 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 GRK7Q8WTQ7 553 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 TOP1MTQ969P6 601 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 ZNF689Q96CS4 500 aaPredicted RBP9.85□□□□□ -0.83
SF3B1-211ENST00000487698 B3GALT6Q96L58 329 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 NEUROG2Q9H2A3 272 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 DPH5Q9H2P9 285 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 GRHL1Q9NZI5 618 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 NT5C1B-RDH14C9J2C7 533 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 LTFP02788 710 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 FAM153BP0C7A2 387 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 CSF2RAP15509 400 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 IL4RP24394 825 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 CYP2F1P24903 491 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 RPL21P46778 160 aaKnown RBP9.85□□□□□ -0.83
SF3B1-211ENST00000487698 SULT1E1P49888 294 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 CDH6P55285 790 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 PTK6Q13882 451 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 OASLQ15646 514 aaKnown RBP9.85□□□□□ -0.83
SF3B1-211ENST00000487698 DPYSL2Q16555 572 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 CA9Q16790 459 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 FAM153CQ494X1 144 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 CTXN3Q4LDR2 81 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 ZC3H12AQ5D1E8 599 aaKnown RBP9.85□□□□□ -0.83
SF3B1-211ENST00000487698 RTP2Q5QGT7 225 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 SCYL2Q6P3W7 929 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 CCDC185Q8N715 623 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 ATL2Q8NHH9 583 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 SLC35B2Q8TB61 432 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 NKD2Q969F2 451 aaPredicted RBP9.85□□□□□ -0.83
SF3B1-211ENST00000487698 FAF2Q96CS3 445 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 GDAP1L1Q96MZ0 367 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 FAM118BQ9BPY3 351 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 VIPAS39Q9H9C1 493 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 PCDH18Q9HCL0 1135 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 ZDHHC18Q9NUE0 388 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 GPATCH2LQ9NWQ4 482 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 FAM153AQ9UHL3 310 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 STAP1Q9ULZ2 295 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 APOC4-APOC2K7ER74 178 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 CST8O60676 142 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 UPP2O95045 317 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 APOC2P02655 101 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 MAGEA11P43364 429 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 VCPP55072 806 aaKnown RBP9.84□□□□□ -0.83
SF3B1-211ENST00000487698 KRT17Q04695 432 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 MMRN1Q13201 1228 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 BYSLQ13895 437 aaKnown RBP9.84□□□□□ -0.83
SF3B1-211ENST00000487698 ERMARDQ5T6L9 678 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 MFSD5Q6N075 450 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 VSTM1Q6UX27 236 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 ZDHHC24Q6UX98 284 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 SND1Q7KZF4 910 aaKnown RBP eCLIP9.84□□□□□ -0.832e-6■□□□□ 10
SF3B1-211ENST00000487698 BEND5Q7L4P6 421 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 UBE2Q1Q7Z7E8 422 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 CEP57Q86XR8 500 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 PSTKQ8IV42 348 aaKnown RBP9.84□□□□□ -0.83
SF3B1-211ENST00000487698 MAP7D3Q8IWC1 876 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 MREGQ8N565 214 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 PGAP3Q96FM1 320 aaPredicted RBP9.84□□□□□ -0.83
SF3B1-211ENST00000487698 ZNF670Q9BS34 389 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 VN1R3Q9BXE9 311 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 CALN1Q9BXU9 219 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 FRMD8P1Q9BZ68 369 aaPredicted RBP9.84□□□□□ -0.83
SF3B1-211ENST00000487698 TRIM31Q9BZY9 425 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 MTMR10Q9NXD2 777 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 RRN3Q9NYV6 651 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 FEZ2Q9UHY8 353 aaPredicted RBP9.84□□□□□ -0.83
SF3B1-211ENST00000487698 DNPEPQ9ULA0 475 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 AP4E1Q9UPM8 1137 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 NAALADL1Q9UQQ1 740 aa9.84□□□□□ -0.83
SF3B1-211ENST00000487698 VNN2O95498 520 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 GAS8O95995 478 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 AMHP03971 560 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 IVDP26440 423 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 L1CAMP32004 1257 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 GBP1P32455 592 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 RDXP35241 583 aaKnown RBP9.83□□□□□ -0.84
SF3B1-211ENST00000487698 TNNT3P45378 269 aaPredicted RBP9.83□□□□□ -0.84
SF3B1-211ENST00000487698 SLC5A3P53794 718 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 WDR5P61964 334 aaKnown RBP9.83□□□□□ -0.84
SF3B1-211ENST00000487698 DEFB103AP81534 67 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 HLTFQ14527 1009 aaKnown RBP eCLIP9.83□□□□□ -0.84
SF3B1-211ENST00000487698 PPP1R7Q15435 360 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 RSPO2Q6UXX9 243 aaPredicted RBP9.83□□□□□ -0.84
SF3B1-211ENST00000487698 TAS1R1Q7RTX1 841 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 RFX6Q8HWS3 928 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 PQLC3Q8N755 202 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 TTC13Q8NBP0 860 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 SCAMP5Q8TAC9 235 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 ACTL9Q8TC94 416 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms