RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 AXLP30530 894 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 SCNN1BP51168 640 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 DDX39BQ13838 428 aaKnown RBP13.8□□□□□ -0.2
HDLBP-241ENST00000487169 TAGAPQ8N103 731 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 ADAM32Q8TC27 787 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 TLR10Q9BXR5 811 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 TEX12Q9BXU0 123 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 UBXN6Q9BZV1 441 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 SYNDIG1Q9H7V2 258 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 KIF17Q9P2E2 1029 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 CLCA2Q9UQC9 943 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 PCDHB12Q9Y5F1 795 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 UBIAD1Q9Y5Z9 338 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 CAMTA1Q9Y6Y1 1673 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 TIMM44O43615 452 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 LZTS3O60299 673 aaPredicted RBP13.79□□□□□ -0.2
HDLBP-241ENST00000487169 TBC1D12O60347 775 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 GLI1P08151 1106 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 ATP6V1E1P36543 226 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 PPP3CCP48454 512 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 OVGP1Q12889 678 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 CELF3Q5SZQ8 465 aaKnown RBP13.79□□□□□ -0.2
HDLBP-241ENST00000487169 AGAP9Q5VTM2 703 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 TFAP2DQ7Z6R9 452 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 NT5DC4Q86YG4 428 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 ICA1LQ8NDH6 482 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 FAM167BQ9BTA0 163 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 FBXO44Q9H4M3 255 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 MTO1Q9Y2Z2 717 aaKnown RBP13.79□□□□□ -0.2
HDLBP-241ENST00000487169 HES2Q9Y543 173 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 NPM3O75607 178 aaKnown RBP13.79□□□□□ -0.2
HDLBP-241ENST00000487169 FAM107AO95990 144 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 GLRA2P23416 452 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 ATXN3P54252 364 aaPredicted RBP13.79□□□□□ -0.2
HDLBP-241ENST00000487169 RHOAP61586 193 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 DNAL1Q4LDG9 190 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 MARC1Q5VT66 337 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 FBXW10Q5XX13 1052 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 LAYNQ6UX15 382 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 MFSD7Q6UXD7 560 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 SNX31Q8N9S9 440 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 DPF3Q92784 378 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 DNAJC19Q96DA6 116 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 CMTM5Q96DZ9 223 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 SENP8Q96LD8 212 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 CEP41Q9BYV8 373 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 SHCBP1LQ9BZQ2 653 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 SPDYE5A6NIY4 337 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 SRP72O76094 671 aaKnown RBP13.79□□□□□ -0.2
HDLBP-241ENST00000487169 PTGISQ16647 500 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 SPDYE7PQ495Y7 208 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 DEFB106AQ8N104 65 aa13.79□□□□□ -0.2
HDLBP-241ENST00000487169 DMAP1Q9NPF5 467 aaPredicted RBP13.79□□□□□ -0.2
HDLBP-241ENST00000487169 PYGMP11217 842 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 MYL4P12829 197 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 GLRBP48167 497 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 LRRC36Q1X8D7 754 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 ERMARDQ5T6L9 678 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 ANKS3Q6ZW76 656 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 ILKAPQ9H0C8 392 aaPredicted RBP13.78□□□□□ -0.2
HDLBP-241ENST00000487169 SEMA4AQ9H3S1 761 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 ACP6Q9NPH0 428 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 TLR8Q9NR97 1041 aaKnown RBP13.78□□□□□ -0.2
HDLBP-241ENST00000487169 TMEM39AQ9NV64 488 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 CHCHD3Q9NX63 227 aaKnown RBP13.78□□□□□ -0.2
HDLBP-241ENST00000487169 NCAM2O15394 837 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 CLASP2O75122 1294 aaKnown RBP13.78□□□□□ -0.2
HDLBP-241ENST00000487169 PAEPP09466 180 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 TCN1P20061 433 aaPredicted RBP13.78□□□□□ -0.2
HDLBP-241ENST00000487169 PTENP60484 403 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 PARP9Q8IXQ6 854 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 COLGALT1Q8NBJ5 622 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 NMRK2Q9NPI5 230 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 KLC4Q9NSK0 619 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 MRGBPQ9NV56 204 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 RIC8BQ9NVN3 520 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 TRPV2Q9Y5S1 764 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 NRCAMQ92823 1304 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 EIF4E1BA6NMX2 242 aaKnown RBP13.78□□□□□ -0.2
HDLBP-241ENST00000487169 CPA2P48052 419 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 MPP3Q13368 585 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 PKN3Q6P5Z2 889 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 NAF1Q96HR8 494 aaKnown RBP13.78□□□□□ -0.2
HDLBP-241ENST00000487169 HSD17B14Q9BPX1 270 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 CXorf56Q9H5V9 222 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 WWOXQ9NZC7 414 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 STX18Q9P2W9 335 aaKnown RBP13.78□□□□□ -0.2
HDLBP-241ENST00000487169 CDYLQ9Y232 598 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 ZSCAN5CA6NGD5 496 aaPredicted RBP13.78□□□□□ -0.2
HDLBP-241ENST00000487169 GLRA3O75311 464 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 VPS26AO75436 327 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 SKAP2O75563 359 aaPredicted RBP13.78□□□□□ -0.2
HDLBP-241ENST00000487169 GJB6O95452 261 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 HMGCRP04035 888 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 SERPINF2P08697 491 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 AMPD1P23109 780 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 ARL4DP49703 201 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 FBXW4P57775 412 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 RETSATQ6NUM9 610 aa13.78□□□□□ -0.2
HDLBP-241ENST00000487169 AGGF1Q8N302 714 aaeCLIP13.78□□□□□ -0.22e-9■■■■■ 27.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms