RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 KLHL11Q9NVR0 708 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 TMEM51Q9NW97 253 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 PCDHB5Q9Y5E4 795 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 DNAH12Q6ZR08 3092 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 ZNF487B1APH4 448 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 HHLA1C9JL84 531 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 BHMG1C9JSJ3 638 aaPredicted RBP7.35□□□□□ -1.23
SF3A3-206ENST00000487062 F8W810 466 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 NDC80O14777 642 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 KIAA0355O15063 1070 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 MDM4O15151 490 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 ENDOD1O94919 500 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 LTFP02788 710 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 GALTP07902 379 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 HSPA1AP0DMV8 641 aaKnown RBP7.35□□□□□ -1.23
SF3A3-206ENST00000487062 HSPA1BP0DMV9 641 aaKnown RBP7.35□□□□□ -1.23
SF3A3-206ENST00000487062 KRT10P13645 584 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 FGFR3P22607 806 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 IL1R2P27930 398 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 GRIK1P39086 918 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 PTGIRP43119 386 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 MAGEA11P43364 429 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 ALDH7A1P49419 539 aaKnown RBP7.35□□□□□ -1.23
SF3A3-206ENST00000487062 CARSP49589 748 aaKnown RBP7.35□□□□□ -1.23
SF3A3-206ENST00000487062 AIF1P55008 147 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 BCAR1P56945 870 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 DEUP1Q05D60 604 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 ADCY1Q08828 1119 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 SNX1Q13596 522 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 MRPL58Q14197 206 aaKnown RBP7.35□□□□□ -1.23
SF3A3-206ENST00000487062 LLGL1Q15334 1064 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 TAF5Q15542 800 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 TAZQ16635 292 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 SMTNL2Q2TAL5 461 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 SLC25A52Q3SY17 297 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 DCAF6Q58WW2 860 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 KCNT1Q5JUK3 1230 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 SPOUT1Q5T280 376 aaKnown RBP7.35□□□□□ -1.23
SF3A3-206ENST00000487062 SH3PXD2AQ5TCZ1 1133 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 DUPD1Q68J44 220 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 TXNRD3NBQ6F5E7 133 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 MFSD5Q6N075 450 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 TRNP1Q6NT89 227 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 TTC27Q6P3X3 843 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 DRICH1Q6PGQ1 229 aaPredicted RBP7.35□□□□□ -1.23
SF3A3-206ENST00000487062 VSTM1Q6UX27 236 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.35□□□□□ -1.23
SF3A3-206ENST00000487062 BBS12Q6ZW61 710 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 ANKS3Q6ZW76 656 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 ZNF365Q70YC5 407 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 LRRTM3Q86VH5 581 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 CEP57Q86XR8 500 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 RFX6Q8HWS3 928 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 PSTKQ8IV42 348 aaKnown RBP7.35□□□□□ -1.23
SF3A3-206ENST00000487062 ZDHHC14Q8IZN3 488 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 ZMIZ2Q8NF64 920 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 CCHCR1Q8TD31 782 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.35□□□□□ -1.23
SF3A3-206ENST00000487062 AENQ8WTP8 325 aaKnown RBP7.35□□□□□ -1.23
SF3A3-206ENST00000487062 C2orf15Q8WU43 125 aaKnown RBP7.35□□□□□ -1.23
SF3A3-206ENST00000487062 C1orf54Q8WWF1 131 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 SEC14L1Q92503 715 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 CENPIQ92674 756 aaPredicted RBP7.35□□□□□ -1.23
SF3A3-206ENST00000487062 CAVIN3Q969G5 261 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 CCDC114Q96M63 670 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 SLC2A13Q96QE2 648 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 TMEM209Q96SK2 561 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 KCNK16Q96T55 309 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 NPY6RQ99463 290 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 HINFPQ9BQA5 517 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 TRIM51Q9BSJ1 452 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 C11orf84Q9BUA3 381 aaPredicted RBP7.35□□□□□ -1.23
SF3A3-206ENST00000487062 CALN1Q9BXU9 219 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 DPH5Q9H2P9 285 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 PLEKHA4Q9H4M7 779 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 PRDM16Q9HAZ2 1276 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 PRDM5Q9NQX1 630 aaPredicted RBP7.35□□□□□ -1.23
SF3A3-206ENST00000487062 TMLHEQ9NVH6 421 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 MARCH5Q9NX47 278 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 NFU1Q9UMS0 254 aa7.35□□□□□ -1.23
SF3A3-206ENST00000487062 DRG1Q9Y295 367 aaKnown RBP7.35□□□□□ -1.23
SF3A3-206ENST00000487062 HTTP42858 3142 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 PLXNA3P51805 1871 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 ESYT3A0FGR9 886 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 ZSCAN5CA6NGD5 496 aaPredicted RBP7.34□□□□□ -1.23
SF3A3-206ENST00000487062 C3orf70A6NLC5 250 aaPredicted RBP7.34□□□□□ -1.23
SF3A3-206ENST00000487062 APOC4-APOC2K7ER74 178 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 M0QYT0 321 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 DAPK3O43293 454 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 LIASO43766 372 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 CST8O60676 142 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 DGKIO75912 1065 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 BAIAP3O94812 1187 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 F9P00740 461 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 APOC2P02655 101 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 USP17L7P0C7H9 530 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 MYBL2P10244 700 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 CPB1P15086 417 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 ZFXP17010 805 aaPredicted RBP7.34□□□□□ -1.23
SF3A3-206ENST00000487062 RDXP35241 583 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms