RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.12□□□□□ -0.47
PRKCB-207ENST00000486868 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.12□□□□□ -0.47
PRKCB-207ENST00000486868 SPDYE4A6NLX3 237 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 GOLGA8KD6RF30 607 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 H7C4K7 107 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 NRP1O14786 923 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 B4GALT3O60512 393 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 EFCAB14O75071 495 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 KRT14P02533 472 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 LTFP02788 710 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 ITGB1P05556 798 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 IL4RP24394 825 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 L1CAMP32004 1257 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 OR1G1P47890 313 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 GJA8P48165 433 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 HCAR3P49019 387 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 PLTPP55058 493 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 TLE2Q04725 743 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 CBLBQ13191 982 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 XRCC4Q13426 336 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 SNX1Q13596 522 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 NOMO1Q15155 1222 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 ZNF280DQ6N043 979 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 CNKSR3Q6P9H4 555 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 C4orf22Q6V702 233 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 TRMT10CQ7L0Y3 403 aaKnown RBP12.12□□□□□ -0.47
PRKCB-207ENST00000486868 PCGF5Q86SE9 256 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 LRRTM3Q86VH5 581 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 RFX6Q8HWS3 928 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 SPATA2LQ8IUW3 424 aaPredicted RBP12.12□□□□□ -0.47
PRKCB-207ENST00000486868 LRRC43Q8N309 656 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 ACTL9Q8TC94 416 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 CLEC4CQ8WTT0 213 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 C2orf15Q8WU43 125 aaKnown RBP12.12□□□□□ -0.47
PRKCB-207ENST00000486868 HSPH1Q92598 858 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 FAM149B1Q96BN6 582 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 C8orf48Q96LL4 319 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 CCDC114Q96M63 670 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 RUFY1Q96T51 708 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 KLHL11Q9NVR0 708 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 FZD10Q9ULW2 581 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 ZNF148Q9UQR1 794 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 FAN1Q9Y2M0 1017 aa12.12□□□□□ -0.47
PRKCB-207ENST00000486868 SF3B1O75533 1304 aaKnown RBP eCLIP12.11□□□□□ -0.472e-6■■■■■ 111.3
PRKCB-207ENST00000486868 ABHD14A-ACY1A0A1B0GW23 586 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 I3L4J1 428 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 APOL1O14791 398 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 TRIM66O15016 1216 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 MCF2LO15068 1137 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 TBC1D4O60343 1298 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 SYF2O95926 243 aaKnown RBP12.11□□□□□ -0.47
PRKCB-207ENST00000486868 FYNP06241 537 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 GALTP07902 379 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 CD48P09326 243 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 NUDT17P0C025 328 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 BDNFP23560 247 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 OAS2P29728 719 aaKnown RBP12.11□□□□□ -0.47
PRKCB-207ENST00000486868 CYP2C18P33260 490 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 HSD17B3P37058 310 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 ADCY8P40145 1251 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 SULT1E1P49888 294 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 OTUD4Q01804 1114 aaKnown RBP12.11□□□□□ -0.47
PRKCB-207ENST00000486868 GABPB1Q06547 395 aaPredicted RBP12.11□□□□□ -0.47
PRKCB-207ENST00000486868 DHX9Q08211 1270 aaKnown RBP12.11□□□□□ -0.47
PRKCB-207ENST00000486868 IKBKEQ14164 716 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 MORF4L2Q15014 288 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 CDO1Q16878 200 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 DCAF6Q58WW2 860 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 ANKRD20A8PQ5CZ79 823 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 SCYL2Q6P3W7 929 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 BHLHA9Q7RTU4 235 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 PLD5Q8N7P1 536 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.11□□□□□ -0.47
PRKCB-207ENST00000486868 PIK3R5Q8WYR1 880 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 HAUS1Q96CS2 278 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 RTP4Q96DX8 246 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 TMEM109Q9BVC6 243 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 CALN1Q9BXU9 219 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 TRIM31Q9BZY9 425 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 PABPC3Q9H361 631 aaKnown RBP12.11□□□□□ -0.47
PRKCB-207ENST00000486868 PLEKHA4Q9H4M7 779 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 MTMR10Q9NXD2 777 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 IL37Q9NZH6 218 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 AP4E1Q9UPM8 1137 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 RAD54BQ9Y620 910 aa12.11□□□□□ -0.47
PRKCB-207ENST00000486868 BCLAF3A2AJT9 711 aaKnown RBP12.1□□□□□ -0.47
PRKCB-207ENST00000486868 HACD1B0YJ81 288 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 H0YGN5 161 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 H3BQF6 201 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 DNALI1O14645 258 aaPredicted RBP12.1□□□□□ -0.47
PRKCB-207ENST00000486868 TNFRSF10BO14763 440 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 CAPN9O14815 690 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 TP73O15350 636 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 EFEMP2O95967 443 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 HTR7P34969 479 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 GGCXP38435 758 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 ARL4AP40617 200 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 NDUFV1P49821 464 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 PMS2P54278 862 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 EIF3EP60228 445 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms