RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 LRRC10BA6NIK2 292 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 FOXN3O00409 490 aaPredicted RBP19.11■□□□□ 0.65
COL1A1-207ENST00000486572 NCAM2O15394 837 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 GALR2O43603 387 aaPredicted RBP19.11■□□□□ 0.65
COL1A1-207ENST00000486572 NFATC1O95644 943 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 PNMA6AP0CW24 399 aaPredicted RBP19.11■□□□□ 0.65
COL1A1-207ENST00000486572 ATP1A3P13637 1013 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 LCP1P13796 627 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 GPD2P43304 727 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 PTK2Q05397 1052 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 GOLGA8FQ08AF8 430 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 GOLGA8DPQ0D2H9 430 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 DRAP1Q14919 205 aaPredicted RBP19.11■□□□□ 0.65
COL1A1-207ENST00000486572 DENND1BQ6P3S1 775 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 TXNDC11Q6PKC3 985 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 BHLHA9Q7RTU4 235 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 FAM71AQ8IYT1 594 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 DTWD2Q8NBA8 298 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 NAA15Q9BXJ9 866 aaKnown RBP19.11■□□□□ 0.65
COL1A1-207ENST00000486572 KLF16Q9BXK1 252 aaPredicted RBP19.11■□□□□ 0.65
COL1A1-207ENST00000486572 LINC00597Q9H2U6 94 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 ECT2Q9H8V3 914 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 NUDT5Q9UKK9 219 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 SH3BP1Q9Y3L3 701 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 MUC6Q6W4X9 2439 aa19.1■□□□□ 0.65
COL1A1-207ENST00000486572 SCAMP3O14828 347 aaKnown RBP19.1■□□□□ 0.65
COL1A1-207ENST00000486572 IRF1P10914 325 aa19.1■□□□□ 0.65
COL1A1-207ENST00000486572 MAGEA9P43362 315 aa19.1■□□□□ 0.65
COL1A1-207ENST00000486572 DAOAP59103 153 aa19.1■□□□□ 0.65
COL1A1-207ENST00000486572 AMPD2Q01433 879 aa19.1■□□□□ 0.65
COL1A1-207ENST00000486572 RSRC2Q7L4I2 434 aaKnown RBP19.1■□□□□ 0.65
COL1A1-207ENST00000486572 APTXQ7Z2E3 356 aaKnown RBP19.1■□□□□ 0.65
COL1A1-207ENST00000486572 ZNF687Q8N1G0 1237 aa19.1■□□□□ 0.65
COL1A1-207ENST00000486572 PRSS33Q8NF86 280 aa19.1■□□□□ 0.65
COL1A1-207ENST00000486572 CLDN23Q96B33 292 aa19.1■□□□□ 0.65
COL1A1-207ENST00000486572 GANQ9H2C0 597 aa19.1■□□□□ 0.65
COL1A1-207ENST00000486572 FAM207AQ9NSI2 230 aaPredicted RBP19.1■□□□□ 0.65
COL1A1-207ENST00000486572 TBC1D14Q9P2M4 693 aa19.1■□□□□ 0.65
COL1A1-207ENST00000486572 SIK3Q9Y2K2 1263 aa19.1■□□□□ 0.65
COL1A1-207ENST00000486572 F5P12259 2224 aa19.1■□□□□ 0.65
COL1A1-207ENST00000486572 YJEFN3A6XGL0 299 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 E7ENQ6 273 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 F8VZ95 297 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 PIK3R2O00459 728 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 MDM4O15151 490 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 GABBR2O75899 941 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 FBXO21O94952 628 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 CLCN1P35523 988 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 RPS9P46781 194 aaKnown RBP19.09■□□□□ 0.65
COL1A1-207ENST00000486572 KLK7P49862 253 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 BPIFB4P59827 614 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 UBXN1Q04323 297 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 NR1H3Q13133 447 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 SYCP1Q15431 976 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 ZSCAN23Q3MJ62 389 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 BTBD8Q5XKL5 378 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 SLC47A2Q86VL8 602 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 MIB1Q86YT6 1006 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 STK32AQ8WU08 396 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 IRGQQ8WZA9 623 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 NDRG1Q92597 394 aaKnown RBP19.09■□□□□ 0.65
COL1A1-207ENST00000486572 OTUB2Q96DC9 234 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 STK33Q9BYT3 514 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 ST7Q9NRC1 585 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 RASAL2Q9UJF2 1139 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 PCDHGC3Q9UN70 934 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 DAAM1Q9Y4D1 1078 aa19.09■□□□□ 0.65
COL1A1-207ENST00000486572 GJA4P35212 333 aa19.08■□□□□ 0.64
COL1A1-207ENST00000486572 ACADSBP45954 432 aa19.08■□□□□ 0.64
COL1A1-207ENST00000486572 RPL34P49207 117 aaKnown RBP19.08■□□□□ 0.64
COL1A1-207ENST00000486572 EFEMP1Q12805 493 aa19.08■□□□□ 0.64
COL1A1-207ENST00000486572 FZD5Q13467 585 aa19.08■□□□□ 0.64
COL1A1-207ENST00000486572 IQCB1Q15051 598 aa19.08■□□□□ 0.64
COL1A1-207ENST00000486572 PON2Q15165 354 aa19.08■□□□□ 0.64
COL1A1-207ENST00000486572 CHFRQ96EP1 664 aa19.08■□□□□ 0.64
COL1A1-207ENST00000486572 PCMTD1Q96MG8 357 aaPredicted RBP19.08■□□□□ 0.64
COL1A1-207ENST00000486572 OLA1Q9NTK5 396 aaKnown RBP19.08■□□□□ 0.64
COL1A1-207ENST00000486572 LSM7Q9UK45 103 aaKnown RBP19.08■□□□□ 0.64
COL1A1-207ENST00000486572 STRIP2Q9ULQ0 834 aa19.08■□□□□ 0.64
COL1A1-207ENST00000486572 SART1O43290 800 aaKnown RBP19.07■□□□□ 0.64
COL1A1-207ENST00000486572 CYP17A1P05093 508 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 KRT9P35527 623 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 PTPN5P54829 565 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 POLR2FP61218 127 aaKnown RBP19.07■□□□□ 0.64
COL1A1-207ENST00000486572 PDCLQ13371 301 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 LRRC32Q14392 662 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 BSPRYQ5W0U4 402 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 HTR3DQ70Z44 454 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 PASD1Q8IV76 773 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 BBS7Q8IWZ6 715 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 ADGRG2Q8IZP9 1017 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 CLEC4CQ8WTT0 213 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 RNF139Q8WU17 664 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 GOLGA1Q92805 767 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 WBP2Q969T9 261 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 EXOC4Q96A65 974 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 ERGIC2Q96RQ1 377 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 SLC4A5Q9BY07 1137 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 MIS12Q9H081 205 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 LHX5Q9H2C1 402 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms