RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 LGALS16A8MUM7 142 aa18.65■□□□□ 0.58
MCF2L-226ENST00000486210 TEX33O43247 280 aa18.65■□□□□ 0.58
MCF2L-226ENST00000486210 NOL4O94818 638 aa18.65■□□□□ 0.58
MCF2L-226ENST00000486210 CEACAM1P13688 526 aa18.65■□□□□ 0.58
MCF2L-226ENST00000486210 CSRP1P21291 193 aaKnown RBP18.65■□□□□ 0.58
MCF2L-226ENST00000486210 NOP14P78316 857 aaKnown RBP18.65■□□□□ 0.58
MCF2L-226ENST00000486210 APBA1Q02410 837 aa18.65■□□□□ 0.58
MCF2L-226ENST00000486210 LRMPQ12912 555 aa18.65■□□□□ 0.58
MCF2L-226ENST00000486210 DDR2Q16832 855 aa18.65■□□□□ 0.58
MCF2L-226ENST00000486210 WDR72Q3MJ13 1102 aa18.65■□□□□ 0.58
MCF2L-226ENST00000486210 GBP6Q6ZN66 633 aa18.65■□□□□ 0.58
MCF2L-226ENST00000486210 SPATA2LQ8IUW3 424 aaPredicted RBP18.65■□□□□ 0.58
MCF2L-226ENST00000486210 ADGRF2Q8IZF7 708 aa18.65■□□□□ 0.58
MCF2L-226ENST00000486210 TOP6BLQ8N6T0 577 aa18.65■□□□□ 0.58
MCF2L-226ENST00000486210 TSTD1Q8NFU3 115 aa18.65■□□□□ 0.58
MCF2L-226ENST00000486210 SCNM1Q9BWG6 230 aa18.65■□□□□ 0.58
MCF2L-226ENST00000486210 TMEM9BQ9NQ34 198 aa18.65■□□□□ 0.58
MCF2L-226ENST00000486210 RTN4Q9NQC3 1192 aaKnown RBP18.65■□□□□ 0.58
MCF2L-226ENST00000486210 GDAP2Q9NXN4 497 aa18.65■□□□□ 0.58
MCF2L-226ENST00000486210 GCNT4Q9P109 453 aa18.65■□□□□ 0.58
MCF2L-226ENST00000486210 IGF2RP11717 2491 aa18.65■□□□□ 0.58
MCF2L-226ENST00000486210 A0A1B0GTH6 734 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 KHNYNO15037 678 aaKnown RBP18.64■□□□□ 0.57
MCF2L-226ENST00000486210 AP5Z1O43299 807 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 CLSTN1O94985 981 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 SERPINC1P01008 464 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 TPM2P07951 284 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 CYP2F1P24903 491 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 KLK7P49862 253 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 IRX4P78413 519 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 CCDC142Q17RM4 750 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 SOWAHAQ2M3V2 549 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 ZNF667Q5HYK9 610 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 DPY19L2P1Q6NXN4 242 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 SCARA5Q6ZMJ2 495 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 LIMS2Q7Z4I7 341 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 USP33Q8TEY7 942 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 TAF4BQ92750 862 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 ATP2A3Q93084 1043 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 TRMT2BQ96GJ1 504 aaKnown RBP18.64■□□□□ 0.57
MCF2L-226ENST00000486210 MYRFLQ96LU7 910 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 PKMYT1Q99640 499 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 SDCBP2Q9H190 292 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 LINC00597Q9H2U6 94 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 SMYD3Q9H7B4 428 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 TRPC7Q9HCX4 862 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 ATRXP46100 2492 aa18.64■□□□□ 0.57
MCF2L-226ENST00000486210 GTPBP10A4D1E9 387 aaKnown RBP18.63■□□□□ 0.57
MCF2L-226ENST00000486210 SRRM3A6NNA2 597 aaPredicted RBP18.63■□□□□ 0.57
MCF2L-226ENST00000486210 K7EQS6 105 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 ACAT1P24752 427 aaKnown RBP18.63■□□□□ 0.57
MCF2L-226ENST00000486210 PON1P27169 355 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 OPRD1P41143 372 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 ASPAP45381 313 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 IFNAR2P48551 515 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 CDH8P55286 799 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 UBXN1Q04323 297 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 CETN1Q12798 172 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 EXOC3L4Q17RC7 722 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 GAB4Q2WGN9 574 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 GJB7Q6PEY0 223 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 C4orf50Q6ZRC1 276 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 OSTM1Q86WC4 334 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 ARHGEF19Q8IW93 802 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 SCN4BQ8IWT1 228 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 ARL14EPQ8N8R7 260 aaPredicted RBP18.63■□□□□ 0.57
MCF2L-226ENST00000486210 TTC16Q8NEE8 873 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 MDGA1Q8NFP4 955 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 FUBP3Q96I24 572 aaKnown RBP eCLIP18.63■□□□□ 0.57
MCF2L-226ENST00000486210 MMS19Q96T76 1030 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 MRPL45Q9BRJ2 306 aaKnown RBP18.63■□□□□ 0.57
MCF2L-226ENST00000486210 SIX2Q9NPC8 291 aa18.63■□□□□ 0.57
MCF2L-226ENST00000486210 C2orf78A6NCI8 922 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 TMEM8BA6NDV4 472 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 HCRTO43612 131 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 USP17L7P0C7H9 530 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 HNRNPLP14866 589 aaKnown RBP eCLIP18.62■□□□□ 0.57
MCF2L-226ENST00000486210 SEC13P55735 322 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 TNNC1P63316 161 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 ZXDBP98169 803 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 NR1I3Q14994 352 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 MAPRE1Q15691 268 aaKnown RBP18.62■□□□□ 0.57
MCF2L-226ENST00000486210 USP39Q53GS9 565 aaKnown RBP18.62■□□□□ 0.57
MCF2L-226ENST00000486210 FKBP15Q5T1M5 1219 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 ANO7Q6IWH7 933 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 TRIM65Q6PJ69 517 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 DPH6Q7L8W6 267 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 CYP2U1Q7Z449 544 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 DEFB124Q8NES8 71 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 SH3RF2Q8TEC5 729 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 KBTBD7Q8WVZ9 684 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 KAT5Q92993 513 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 ARID3AQ99856 593 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 IMPG2Q9BZV3 1241 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 NIF3L1Q9GZT8 377 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 IFNKQ9P0W0 207 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 GTF3C4Q9UKN8 822 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 NME7Q9Y5B8 376 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 PLXND1Q9Y4D7 1925 aa18.62■□□□□ 0.57
MCF2L-226ENST00000486210 AKAP13Q12802 2813 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms