RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 ADAM32Q8TC27 787 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 NT5C3BQ969T7 300 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 NPY6RQ99463 290 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 ALG13Q9NP73 1137 aaKnown RBP15.07■□□□□ 0
COL9A1-207ENST00000486080 MRPL17Q9NRX2 175 aaKnown RBP15.07■□□□□ 0
COL9A1-207ENST00000486080 COL4A4P53420 1690 aaPredicted RBP15.07■□□□□ 0
COL9A1-207ENST00000486080 RANBP2P49792 3224 aaKnown RBP15.06■□□□□ 0
COL9A1-207ENST00000486080 SYNJ2BP-COX16A0A087WUM0 186 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 KRIT1O00522 736 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 CAPN9O14815 690 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 KRT7P08729 469 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 RARAP10276 462 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 ATF6P18850 670 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 MFSD7Q6UXD7 560 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 SCD5Q86SK9 330 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 SLC13A5Q86YT5 568 aaPredicted RBP15.06■□□□□ 0
COL9A1-207ENST00000486080 RCOR2Q8IZ40 523 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 GIPC2Q8TF65 315 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 UBXN4Q92575 508 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 HSPH1Q92598 858 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 RPGRIP1Q96KN7 1286 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 SLITRK1Q96PX8 696 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 C17orf80Q9BSJ5 609 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 HEMGNQ9BXL5 484 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 COX16Q9P0S2 106 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 AFF4Q9UHB7 1163 aaKnown RBP15.06■□□□□ 0
COL9A1-207ENST00000486080 LRRD1A4D1F6 860 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 C3orf70A6NLC5 250 aaPredicted RBP15.06■□□□□ 0
COL9A1-207ENST00000486080 TEX28O15482 410 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 PRPSAP2O60256 369 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 CSPG5O95196 566 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 CTSAP10619 480 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 RALAP11233 206 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 CA8P35219 290 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 MRPS25P82663 173 aaKnown RBP15.06■□□□□ 0
COL9A1-207ENST00000486080 ITIH3Q06033 890 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 SMC1AQ14683 1233 aaKnown RBP15.06■□□□□ 0
COL9A1-207ENST00000486080 ELF2Q15723 593 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 SPATA17Q96L03 361 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 NMUR1Q9HB89 426 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 GPATCH2LQ9NWQ4 482 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 DDX56Q9NY93 547 aaKnown RBP15.06■□□□□ 0
COL9A1-207ENST00000486080 IL37Q9NZH6 218 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 MTUS1Q9ULD2 1270 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 SCML2Q9UQR0 700 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 NR2E3Q9Y5X4 410 aa15.06■□□□□ 0
COL9A1-207ENST00000486080 CHD9Q3L8U1 2897 aa15.05■□□□□ 0
COL9A1-207ENST00000486080 A0A1W2PQH9 124 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 M0QYT0 321 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 CD48P09326 243 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 KRT10P13645 584 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 DESP17661 470 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 DNAJB1P25685 340 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 YWHAGP61981 247 aaKnown RBP eCLIP15.05■□□□□ -0
COL9A1-207ENST00000486080 RPL10AP62906 217 aaKnown RBP15.05■□□□□ -0
COL9A1-207ENST00000486080 NME3Q13232 169 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 RAB33AQ14088 237 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 TPGS2Q68CL5 300 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 SPOCD1Q6ZMY3 1216 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 DENND5BQ6ZUT9 1274 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 BNIPLQ7Z465 357 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 SLC7A14Q8TBB6 771 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 PLVAPQ9BX97 442 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 MAGEB5Q9BZ81 275 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 CYP4F11Q9HBI6 524 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 OSER1Q9NX31 292 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 STAP1Q9ULZ2 295 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 PDE4DIPQ5VU43 2346 aa15.05■□□□□ -0
COL9A1-207ENST00000486080 FSCN2O14926 492 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 ENDOD1O94919 500 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 CXCL14O95715 111 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 CNPP09543 421 aaKnown RBP15.04■□□□□ -0
COL9A1-207ENST00000486080 RHOXF2BP0C7M4 288 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 SPATA31D3P0C874 917 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 ATF2P15336 505 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 KDELR1P24390 212 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 YWHAQP27348 245 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 ERVFC1P60507 584 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 ADCY2Q08462 1091 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 SIX1Q15475 284 aaPredicted RBP15.04■□□□□ -0
COL9A1-207ENST00000486080 CA9Q16790 459 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 ZC3H12AQ5D1E8 599 aaKnown RBP15.04■□□□□ -0
COL9A1-207ENST00000486080 SPATA31D4Q6ZUB0 917 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 STRADAQ7RTN6 431 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 TMC7Q7Z402 723 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 FAM131BQ86XD5 332 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 KLHL7Q8IXQ5 586 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 MMGT1Q8N4V1 131 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 CCDC185Q8N715 623 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 CMASQ8NFW8 434 aaPredicted RBP15.04■□□□□ -0
COL9A1-207ENST00000486080 RBM41Q96IZ5 413 aaKnown RBP15.04■□□□□ -0
COL9A1-207ENST00000486080 KRT12Q99456 494 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 NAP1L3Q99457 506 aaPredicted RBP15.04■□□□□ -0
COL9A1-207ENST00000486080 RHOXF2Q9BQY4 288 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 OSBPL8Q9BZF1 889 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 FBXO44Q9H4M3 255 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 RXFP1Q9HBX9 757 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 PIGVQ9NUD9 493 aa15.04■□□□□ -0
COL9A1-207ENST00000486080 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.04■□□□□ -0
COL9A1-207ENST00000486080 GMIPQ9P107 970 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms