RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 OSER1Q9NX31 292 aa13.14□□□□□ -0.31
PTCD1-205ENST00000485746 CLIC5Q9NZA1 410 aa13.14□□□□□ -0.31
PTCD1-205ENST00000485746 TMEM63CQ9P1W3 806 aa13.14□□□□□ -0.31
PTCD1-205ENST00000485746 SLC12A8A0AV02 714 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 TRDMT1O14717 391 aaKnown RBP13.13□□□□□ -0.31
PTCD1-205ENST00000485746 SP9P0CG40 484 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 PTMSP20962 102 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 DRD1P21728 446 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 ZNF132P52740 706 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 COG7P83436 770 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 MYL5Q02045 173 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 GAD2Q05329 585 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 PTK2Q05397 1052 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 FZD5Q13467 585 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 ANO4Q32M45 955 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 MIIPQ5JXC2 388 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 KLHDC10Q6PID8 442 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 ZC3H14Q6PJT7 736 aaKnown RBP13.13□□□□□ -0.31
PTCD1-205ENST00000485746 SLC35F5Q8WV83 523 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 CHFRQ96EP1 664 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 ZFRQ96KR1 1074 aaKnown RBP13.13□□□□□ -0.31
PTCD1-205ENST00000485746 HSFY1Q96LI6 401 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 MIS12Q9H081 205 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 PDCL3Q9H2J4 239 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 CNGB3Q9NQW8 809 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 OLA1Q9NTK5 396 aaKnown RBP13.13□□□□□ -0.31
PTCD1-205ENST00000485746 MARCH2Q9P0N8 246 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 CNTN6Q9UQ52 1028 aa13.13□□□□□ -0.31
PTCD1-205ENST00000485746 FBXO21O94952 628 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 EGFP01133 1207 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 CYP17A1P05093 508 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 ADH5P11766 374 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 KRT9P35527 623 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 ACADSBP45954 432 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 CXCL12P48061 93 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 CCR3P51677 355 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 KRT31Q15323 416 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 PKDCCQ504Y2 493 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 TMEM196Q5HYL7 178 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 LY6G5CQ5SRR4 150 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 PM20D1Q6GTS8 502 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 PMF1Q6P1K2 205 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 DENND1BQ6P3S1 775 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 HTR3DQ70Z44 454 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 ALYREFQ86V81 257 aaKnown RBP13.12□□□□□ -0.31
PTCD1-205ENST00000485746 BBS7Q8IWZ6 715 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 ZNF687Q8N1G0 1237 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 SYNPOQ8N3V7 929 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 ZNF606Q8WXB4 792 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 EDEM1Q92611 657 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 WBP2Q969T9 261 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 ZSWIM1Q9BR11 485 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 DCLK3Q9C098 648 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 ABCC13Q9NSE7 274 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 FBXO4Q9UKT5 387 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 ZNF510Q9Y2H8 683 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 TRIOO75962 3097 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 NUP210Q8TEM1 1887 aaPredicted RBP13.12□□□□□ -0.31
PTCD1-205ENST00000485746 COL4A3Q01955 1670 aa13.12□□□□□ -0.31
PTCD1-205ENST00000485746 SMTNL1A8MU46 457 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 ATG13O75143 517 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 DAOAP59103 153 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 BPIFB4P59827 614 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 KCNMA1Q12791 1236 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 DRAP1Q14919 205 aaPredicted RBP13.11□□□□□ -0.31
PTCD1-205ENST00000485746 FBXO43Q4G163 708 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 PREPLQ4J6C6 727 aaPredicted RBP13.11□□□□□ -0.31
PTCD1-205ENST00000485746 ANO6Q4KMQ2 910 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 KLHDC7AQ5VTJ3 777 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 CDKAL1Q5VV42 579 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 BSPRYQ5W0U4 402 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 FSTL4Q6MZW2 842 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 RHBDF2Q6PJF5 856 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 TPGS1Q6ZTW0 290 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 NUDT18Q6ZVK8 323 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 SPEM1Q8N4L4 309 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 ZNF276Q8N554 614 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 AOPEPQ8N6M6 819 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 NAT16Q8N8M0 369 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 CCDC26Q8TAB7 109 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 ATRIPQ8WXE1 791 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 IRGQQ8WZA9 623 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 SHC3Q92529 594 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 FAM149B1Q96BN6 582 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 PNKPQ96T60 521 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 PHOX2BQ99453 314 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 SIX2Q9NPC8 291 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 SPHK2Q9NRA0 654 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 CEP83Q9Y592 693 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 PTPRDP23468 1912 aa13.11□□□□□ -0.31
PTCD1-205ENST00000485746 YJEFN3A6XGL0 299 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 BECN2A8MW95 431 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.1□□□□□ -0.31
PTCD1-205ENST00000485746 E7ENQ6 273 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 FOXN3O00409 490 aaPredicted RBP13.1□□□□□ -0.31
PTCD1-205ENST00000485746 SART1O43290 800 aaKnown RBP13.1□□□□□ -0.31
PTCD1-205ENST00000485746 RNF40O75150 1001 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 STC2O76061 302 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 APODP05090 189 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 GPD2P43304 727 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms