RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, human

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMC4-215	ENST00000484799	CPA2	P48052	419 aa		4.97	□□□□□ -1.61
SMC4-215	ENST00000484799	RPS16	P62249	146 aa	Known RBP	4.97	□□□□□ -1.61
SMC4-215	ENST00000484799	SLC9C1	Q4G0N8	1177 aa		4.97	□□□□□ -1.61
SMC4-215	ENST00000484799	APOA5	Q6Q788	366 aa		4.97	□□□□□ -1.61
SMC4-215	ENST00000484799	SRGAP1	Q7Z6B7	1085 aa		4.97	□□□□□ -1.61
SMC4-215	ENST00000484799	TECPR1	Q7Z6L1	1165 aa		4.97	□□□□□ -1.61
SMC4-215	ENST00000484799	MICU3	Q86XE3	530 aa		4.97	□□□□□ -1.61
SMC4-215	ENST00000484799	LIX1L	Q8IVB5	337 aa		4.97	□□□□□ -1.61
SMC4-215	ENST00000484799	RUNDC1	Q96C34	613 aa		4.97	□□□□□ -1.61
SMC4-215	ENST00000484799	SIGLEC11	Q96RL6	698 aa		4.97	□□□□□ -1.61
SMC4-215	ENST00000484799	WAC	Q9BTA9	647 aa		4.97	□□□□□ -1.61
SMC4-215	ENST00000484799	ADGRE3	Q9BY15	652 aa		4.97	□□□□□ -1.61
SMC4-215	ENST00000484799	TBC1D23	Q9NUY8	699 aa		4.97	□□□□□ -1.61
SMC4-215	ENST00000484799	DNAJB11	Q9UBS4	358 aa		4.97	□□□□□ -1.61
SMC4-215	ENST00000484799	MID2	Q9UJV3	735 aa		4.97	□□□□□ -1.61
SMC4-215	ENST00000484799		H3BNX3	289 aa		4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	FRS3	O43559	492 aa		4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	SPRY2	O43597	315 aa		4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	PARP1	P09874	1014 aa	Known RBP	4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	TXN	P10599	105 aa	Known RBP	4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	APEH	P13798	732 aa	Known RBP	4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	ADRA1D	P25100	572 aa		4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	ME1	P48163	572 aa		4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	EIF4A1	P60842	406 aa	Known RBP	4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	RPS13	P62277	151 aa	Known RBP	4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	CCDC15	Q0P6D6	951 aa		4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	POLD3	Q15054	466 aa	Predicted RBP	4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	NPY5R	Q15761	445 aa		4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	AWAT1	Q58HT5	328 aa		4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	TMTC4	Q5T4D3	741 aa		4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	RNF44	Q7L0R7	432 aa		4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	COL23A1	Q86Y22	540 aa	Predicted RBP	4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	MAML1	Q92585	1016 aa		4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	APIP	Q96GX9	242 aa		4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	CHST8	Q9H2A9	424 aa		4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	STK32B	Q9NY57	414 aa		4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	ZNF212	Q9UDV6	495 aa		4.96	□□□□□ -1.62
SMC4-215	ENST00000484799	SQOR	Q9Y6N5	450 aa		4.96	□□□□□ -1.62
SMC4-215	ENST00000484799		A8MVJ9	347 aa		4.95	□□□□□ -1.62
SMC4-215	ENST00000484799		H3BNC9	293 aa		4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	FYB1	O15117	783 aa		4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	SLC3A2	P08195	630 aa	Known RBP	4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	TMEM225B	P0DP42	221 aa		4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	CYP19A1	P11511	503 aa	Predicted RBP	4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	MYF5	P13349	255 aa		4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	BTF3	P20290	206 aa	Known RBP	4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	CARS	P49589	748 aa	Known RBP	4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	HSF1	Q00613	529 aa		4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	C10orf25	Q5T742	122 aa		4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	UNC13D	Q70J99	1090 aa		4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	PNPLA1	Q8N8W4	532 aa		4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	JDP2	Q8WYK2	163 aa		4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	CTHRC1	Q96CG8	243 aa		4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	HIC2	Q96JB3	615 aa		4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	EBF3	Q9H4W6	596 aa		4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	TMEM184C	Q9NVA4	438 aa		4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	SNX13	Q9Y5W8	968 aa		4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	HS3ST3B1	Q9Y662	390 aa		4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	FER1L4	A9Z1Z3	1794 aa		4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.95	□□□□□ -1.62
SMC4-215	ENST00000484799	SCGB1D2	O95969	90 aa		4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	CBSL	P0DN79	551 aa		4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	PRF1	P14222	555 aa		4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	RPL17	P18621	184 aa	Known RBP	4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	CBS	P35520	551 aa		4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	FAM193A	P78312	1265 aa		4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	TWIST1	Q15672	202 aa		4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	GFOD2	Q3B7J2	385 aa		4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	CCDC181	Q5TID7	509 aa		4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	PLAG1	Q6DJT9	500 aa		4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	TCEAL8	Q8IYN2	117 aa		4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	MYO1H	Q8N1T3	1032 aa		4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	MAGEB6	Q8N7X4	407 aa		4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	NRAC	Q8N912	160 aa		4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	PNISR	Q8TF01	805 aa	Known RBP	4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	COQ8B	Q96D53	544 aa		4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	NUAK2	Q9H093	628 aa		4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	HPSE	Q9Y251	543 aa		4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	EID1	Q9Y6B2	187 aa		4.94	□□□□□ -1.62
SMC4-215	ENST00000484799	ZMYM2	Q9UBW7	1377 aa		4.93	□□□□□ -1.62
SMC4-215	ENST00000484799	TTC34	A8MYJ7	566 aa		4.93	□□□□□ -1.62
SMC4-215	ENST00000484799	TRIM38	O00635	465 aa		4.93	□□□□□ -1.62
SMC4-215	ENST00000484799	NTN1	O95631	604 aa		4.93	□□□□□ -1.62
SMC4-215	ENST00000484799	HOXD9	P28356	352 aa	Predicted RBP	4.93	□□□□□ -1.62
SMC4-215	ENST00000484799	NTSR1	P30989	418 aa		4.93	□□□□□ -1.62
SMC4-215	ENST00000484799	KCNJ4	P48050	445 aa		4.93	□□□□□ -1.62
SMC4-215	ENST00000484799	JAK3	P52333	1124 aa		4.93	□□□□□ -1.62
SMC4-215	ENST00000484799	KCNAB1	Q14722	419 aa		4.93	□□□□□ -1.62
SMC4-215	ENST00000484799	NFE2	Q16621	373 aa	Predicted RBP	4.93	□□□□□ -1.62
SMC4-215	ENST00000484799	NXN	Q6DKJ4	435 aa		4.93	□□□□□ -1.62
SMC4-215	ENST00000484799	SWSAP1	Q6NVH7	229 aa		4.93	□□□□□ -1.62
SMC4-215	ENST00000484799	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.93	□□□□□ -1.62
SMC4-215	ENST00000484799	IRF2BP2	Q7Z5L9	587 aa		4.93	□□□□□ -1.62
SMC4-215	ENST00000484799	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
SMC4-215	ENST00000484799	CCDC150	Q8NCX0	1101 aa		4.93	□□□□□ -1.62
SMC4-215	ENST00000484799	FAM156A	Q8NDB6	213 aa		4.93	□□□□□ -1.62
SMC4-215	ENST00000484799	ZNF398	Q8TD17	642 aa		4.93	□□□□□ -1.62
SMC4-215	ENST00000484799	TRMO	Q9BU70	441 aa		4.93	□□□□□ -1.62

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