RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 HESX1Q9UBX0 185 aa13.57□□□□□ -0.24
HDAC1-209ENST00000484305 KIAA1257Q9ULG3 409 aa13.57□□□□□ -0.24
HDAC1-209ENST00000484305 PAPSS2O95340 614 aaPredicted RBP13.56□□□□□ -0.24
HDAC1-209ENST00000484305 RALAP11233 206 aa13.56□□□□□ -0.24
HDAC1-209ENST00000484305 BRD2P25440 801 aaKnown RBP13.56□□□□□ -0.24
HDAC1-209ENST00000484305 SLC6A11P48066 632 aa13.56□□□□□ -0.24
HDAC1-209ENST00000484305 PSEN1P49768 467 aa13.56□□□□□ -0.24
HDAC1-209ENST00000484305 NRLP54845 237 aa13.56□□□□□ -0.24
HDAC1-209ENST00000484305 MESP2Q0VG99 397 aa13.56□□□□□ -0.24
HDAC1-209ENST00000484305 TPD52L1Q16890 204 aaPredicted RBP13.56□□□□□ -0.24
HDAC1-209ENST00000484305 LY6G5CQ5SRR4 150 aa13.56□□□□□ -0.24
HDAC1-209ENST00000484305 LCLAT1Q6UWP7 414 aa13.56□□□□□ -0.24
HDAC1-209ENST00000484305 HTR3DQ70Z44 454 aa13.56□□□□□ -0.24
HDAC1-209ENST00000484305 C12orf40Q86WS4 652 aa13.56□□□□□ -0.24
HDAC1-209ENST00000484305 ZNF276Q8N554 614 aa13.56□□□□□ -0.24
HDAC1-209ENST00000484305 RBBP8NLQ8NC74 664 aaPredicted RBP13.56□□□□□ -0.24
HDAC1-209ENST00000484305 GPT2Q8TD30 523 aa13.56□□□□□ -0.24
HDAC1-209ENST00000484305 EXOC4Q96A65 974 aa13.56□□□□□ -0.24
HDAC1-209ENST00000484305 OTUB2Q96DC9 234 aa13.56□□□□□ -0.24
HDAC1-209ENST00000484305 IPO9Q96P70 1041 aaKnown RBP13.56□□□□□ -0.24
HDAC1-209ENST00000484305 CRACR2AQ9BSW2 395 aa13.56□□□□□ -0.24
HDAC1-209ENST00000484305 ULBP1Q9BZM6 244 aa13.56□□□□□ -0.24
HDAC1-209ENST00000484305 CLIC5Q9NZA1 410 aa13.56□□□□□ -0.24
HDAC1-209ENST00000484305 DNMT3LQ9UJW3 386 aa13.56□□□□□ -0.24
HDAC1-209ENST00000484305 EP300Q09472 2414 aaPredicted RBP13.55□□□□□ -0.24
HDAC1-209ENST00000484305 ANTXRLA6NF34 631 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 CHURC1-FNTBB4DL54 471 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 K7EQS6 105 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 ZBED1O96006 694 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 ADH1CP00326 375 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 ADH5P11766 374 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 SLC9A1P19634 815 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 PLA2G4AP47712 749 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 FNTBP49356 437 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 ZNF132P52740 706 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 APBA1Q02410 837 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 ADIGQ0VDE8 80 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 CNGA2Q16280 664 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 FBXO43Q4G163 708 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 HEATR6Q6AI08 1181 aaKnown RBP13.55□□□□□ -0.24
HDAC1-209ENST00000484305 PM20D1Q6GTS8 502 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 GJB7Q6PEY0 223 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 TRIM65Q6PJ69 517 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 BHLHA9Q7RTU4 235 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 MIB1Q86YT6 1006 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 GBP4Q96PP9 640 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 THAP9Q9H5L6 903 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 LRRC4Q9HBW1 653 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 UBE2TQ9NPD8 197 aaPredicted RBP13.55□□□□□ -0.24
HDAC1-209ENST00000484305 SPHK2Q9NRA0 654 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.55□□□□□ -0.24
HDAC1-209ENST00000484305 CNTN6Q9UQ52 1028 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 OTOGLQ3ZCN5 2332 aa13.55□□□□□ -0.24
HDAC1-209ENST00000484305 EML5Q05BV3 1969 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 MYO18AQ92614 2054 aaKnown RBP13.54□□□□□ -0.24
HDAC1-209ENST00000484305 ATG13O75143 517 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 GABBR2O75899 941 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 STC2O76061 302 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 SETSIPP0DME0 302 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 ERCC5P28715 1186 aaPredicted RBP13.54□□□□□ -0.24
HDAC1-209ENST00000484305 MTIF2P46199 727 aaKnown RBP13.54□□□□□ -0.24
HDAC1-209ENST00000484305 RGS7P49802 495 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 YWHAGP61981 247 aaKnown RBP eCLIP13.54□□□□□ -0.24
HDAC1-209ENST00000484305 GAD2Q05329 585 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 GOLGA8FQ08AF8 430 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 GOLGA8DPQ0D2H9 430 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 EFEMP1Q12805 493 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 HSP90AA4PQ58FG1 418 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 PMF1Q6P1K2 205 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 TADA2BQ86TJ2 420 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 TMEM25Q86YD3 366 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 SFTPA1Q8IWL2 248 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 ARHGAP18Q8N392 663 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 NAT16Q8N8M0 369 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 RPLP0P6Q8NHW5 317 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 SLC35F5Q8WV83 523 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 KCTD13Q8WZ19 329 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 SECISBP2LQ93073 1101 aaKnown RBP13.54□□□□□ -0.24
HDAC1-209ENST00000484305 CDK5RAP1Q96SZ6 601 aaKnown RBP13.54□□□□□ -0.24
HDAC1-209ENST00000484305 PNKPQ96T60 521 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 WDR87Q6ZQQ6 2873 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 GPR179Q6PRD1 2367 aa13.54□□□□□ -0.24
HDAC1-209ENST00000484305 YJEFN3A6XGL0 299 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 E7ENQ6 273 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 M0QYV0 167 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 PIK3R2O00459 728 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 KRT5P13647 590 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 LCP1P13796 627 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 PON1P27169 355 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 HOXA6P31267 233 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 EIF2DP41214 584 aaKnown RBP13.53□□□□□ -0.24
HDAC1-209ENST00000484305 MFAP3P55082 362 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 SEC13P55735 322 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 KDSRQ06136 332 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 STILQ15468 1287 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 ANO4Q32M45 955 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 C2orf27AQ580R0 203 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 GBP6Q6ZN66 633 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 Q6ZNB5 142 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 USP33Q8TEY7 942 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms