RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 GPD1P21695 349 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 PSMA2P25787 234 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 CETN2P41208 172 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 ALDH1A3P47895 512 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 PSEN1P49768 467 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 ADCY1Q08828 1119 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 VEPH1Q14D04 833 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 LRRC38Q5VT99 294 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 PM20D1Q6GTS8 502 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 RNF19BQ6ZMZ0 732 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 PHLDB2Q86SQ0 1253 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 NT5DC3Q86UY8 548 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 ATAD1Q8NBU5 361 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 ZMIZ2Q8NF64 920 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 FAM149B1Q96BN6 582 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 PGLYRP2Q96PD5 576 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 SEPT5Q99719 369 aaPredicted RBP14.63□□□□□ -0.07
SMAD9-204ENST00000483941 TCF25Q9BQ70 676 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 POPDC2Q9HBU9 364 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 ENTPD7Q9NQZ7 604 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 TLR9Q9NR96 1032 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.63□□□□□ -0.07
SMAD9-204ENST00000483941 TMEM59LQ9UK28 342 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 USP3Q9Y6I4 520 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 TSC2P49815 1807 aa14.63□□□□□ -0.07
SMAD9-204ENST00000483941 WDR27A2RRH5 827 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 C2CD4BA6NLJ0 364 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 TMEM110-MUSTN1A8MSY1 372 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 HHLA1C9JL84 531 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 DPYSL4O14531 572 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 LINC01565O15544 149 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 LILRB3O75022 631 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 FTCDO95954 541 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 KRT7P08729 469 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 COMTP21964 271 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 CA8P35219 290 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 NOS2P35228 1153 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 RFC1P35251 1148 aaPredicted RBP14.62□□□□□ -0.07
SMAD9-204ENST00000483941 GTF2F1P35269 517 aaKnown RBP eCLIP14.62□□□□□ -0.077e-6■■■■□ 21.3
SMAD9-204ENST00000483941 PCK1P35558 622 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 MATKP42679 507 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 PTPN9P43378 593 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 SLC5A3P53794 718 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 DAOAP59103 153 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 RNASE9P60153 205 aaKnown RBP14.62□□□□□ -0.07
SMAD9-204ENST00000483941 RPL7AP62424 266 aaKnown RBP14.62□□□□□ -0.07
SMAD9-204ENST00000483941 DUSP4Q13115 394 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 TAF12Q16514 161 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 ODF2Q5BJF6 829 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 CCDC149Q6ZUS6 474 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 DENND5BQ6ZUT9 1274 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 MON1AQ86VX9 555 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 RHOT1Q8IXI2 618 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 TCEAL8Q8IYN2 117 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 SPPL3Q8TCT6 385 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 MICAL1Q8TDZ2 1067 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 HES6Q96HZ4 224 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 CDK5RAP1Q96SZ6 601 aaKnown RBP14.62□□□□□ -0.07
SMAD9-204ENST00000483941 ULBP1Q9BZM6 244 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 IGFLR1Q9H665 355 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 RRAGDQ9NQL2 400 aaPredicted RBP14.62□□□□□ -0.07
SMAD9-204ENST00000483941 SNX12Q9UMY4 172 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 SCML2Q9UQR0 700 aa14.62□□□□□ -0.07
SMAD9-204ENST00000483941 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.61□□□□□ -0.07
SMAD9-204ENST00000483941 PRRG1O14668 218 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 PSTPIP1O43586 416 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 DAB1O75553 588 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 F9P00740 461 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 CTNNA2P26232 953 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 YWHAQP27348 245 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 PAFAH1B1P43034 410 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 PPP3CCP48454 512 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 TUBB4BP68371 445 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 ZXDAP98168 799 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 CKAP4Q07065 602 aaKnown RBP14.61□□□□□ -0.07
SMAD9-204ENST00000483941 CCDC142Q17RM4 750 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 WHAMMP3Q1A5X7 153 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 RSPO2Q6UXX9 243 aaPredicted RBP14.61□□□□□ -0.07
SMAD9-204ENST00000483941 TADA2BQ86TJ2 420 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 ITIH5Q86UX2 942 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 FBXL6Q8N531 539 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 MRPL43Q8N983 215 aaKnown RBP14.61□□□□□ -0.07
SMAD9-204ENST00000483941 PDZD8Q8NEN9 1154 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 POF1BQ8WVV4 589 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 RXFP2Q8WXD0 754 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 OVCA2Q8WZ82 227 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 SLITRK1Q96PX8 696 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 NAP1L3Q99457 506 aaPredicted RBP14.61□□□□□ -0.07
SMAD9-204ENST00000483941 DDX23Q9BUQ8 820 aaKnown RBP14.61□□□□□ -0.07
SMAD9-204ENST00000483941 CYP4F11Q9HBI6 524 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 ABCC13Q9NSE7 274 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 FAM86C1Q9NVL1 165 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 DDX56Q9NY93 547 aaKnown RBP14.61□□□□□ -0.07
SMAD9-204ENST00000483941 TJP2Q9UDY2 1190 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 CHORDC1Q9UHD1 332 aaPredicted RBP14.61□□□□□ -0.07
SMAD9-204ENST00000483941 CDC23Q9UJX2 597 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 ASB3Q9Y575 518 aa14.61□□□□□ -0.07
SMAD9-204ENST00000483941 FAM170AA1A519 330 aa14.6□□□□□ -0.07
SMAD9-204ENST00000483941 PIK3R2O00459 728 aa14.6□□□□□ -0.07
SMAD9-204ENST00000483941 ENC1O14682 589 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms