RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 BTBD6Q96KE9 485 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 CNPY3Q9BT09 278 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 AP1M1Q9BXS5 423 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 DUSP16Q9BY84 665 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 DDX47Q9H0S4 455 aaKnown RBP5.68□□□□□ -1.5
COL17A1-206ENST00000483876 TSPYL1Q9H0U9 437 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 ELAC1Q9H777 363 aaKnown RBP5.68□□□□□ -1.5
COL17A1-206ENST00000483876 SYNCQ9H7C4 482 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 RSAD1Q9HA92 442 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 PRDM16Q9HAZ2 1276 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 EPB41L5Q9HCM4 733 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 SMARCAL1Q9NZC9 954 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 EHD2Q9NZN4 543 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 KLK14Q9P0G3 267 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 CHORDC1Q9UHD1 332 aaPredicted RBP5.68□□□□□ -1.5
COL17A1-206ENST00000483876 AMACRQ9UHK6 382 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 CYTH4Q9UIA0 394 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 RASAL2Q9UJF2 1139 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 TSPAN16Q9UKR8 245 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 NR2E1Q9Y466 385 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 C2CD4BA6NLJ0 364 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 ZNF487B1APH4 448 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 C9IYK1 514 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 F8VP50 259 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 M0QZQ0 153 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 DPYSL4O14531 572 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 NDC80O14777 642 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 PPEF2O14830 753 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 XPO1O14980 1071 aaKnown RBP5.67□□□□□ -1.5
COL17A1-206ENST00000483876 MAP3K13O43283 966 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 ENDOD1O94919 500 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 CSPG5O95196 566 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 CYP11A1P05108 521 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 FGFR1P11362 822 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 SELPP16109 830 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 PTPN1P18031 435 aaKnown RBP5.67□□□□□ -1.5
COL17A1-206ENST00000483876 ITIH2P19823 946 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 TYMPP19971 482 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 TGM1P22735 817 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 PSMA2P25787 234 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 LMO2P25791 158 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 PCSK1P29120 753 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 COILP38432 576 aaPredicted RBP5.67□□□□□ -1.5
COL17A1-206ENST00000483876 PTGIRP43119 386 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 PTPN9P43378 593 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 MARCKSL1P49006 195 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 BCAT1P54687 386 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 SLC7A5Q01650 507 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 CAV1Q03135 178 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 C19orf57Q0VDD7 668 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 ZNF211Q13398 564 aaPredicted RBP5.67□□□□□ -1.5
COL17A1-206ENST00000483876 TUSC3Q13454 348 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 BFSP2Q13515 415 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 MAPRE1Q15691 268 aaKnown RBP5.67□□□□□ -1.5
COL17A1-206ENST00000483876 C2CD6Q53TS8 623 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 TFDP3Q5H9I0 405 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 EFHC1Q5JVL4 640 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 GLRA4Q5JXX5 417 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 PPP1R26Q5T8A7 1209 aaPredicted RBP5.67□□□□□ -1.5
COL17A1-206ENST00000483876 PMF1Q6P1K2 205 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 CNKSR3Q6P9H4 555 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 CCDC137Q6PK04 289 aaKnown RBP5.67□□□□□ -1.5
COL17A1-206ENST00000483876 SLC26A9Q7LBE3 791 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 RTN4RL1Q86UN2 441 aaPredicted RBP5.67□□□□□ -1.5
COL17A1-206ENST00000483876 PDZD3Q86UT5 571 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 ECHDC2Q86YB7 292 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 PSTKQ8IV42 348 aaKnown RBP5.67□□□□□ -1.5
COL17A1-206ENST00000483876 MAP7D3Q8IWC1 876 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 ADGRF2Q8IZF7 708 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 ZDHHC14Q8IZN3 488 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 IQCKQ8N0W5 287 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 SCML4Q8N228 414 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 C12orf29Q8N999 325 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 TTC13Q8NBP0 860 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 B3GALNT2Q8NCR0 500 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 BBOF1Q8ND07 529 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 UBA3Q8TBC4 463 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 CCHCR1Q8TD31 782 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 SP7Q8TDD2 431 aaPredicted RBP5.67□□□□□ -1.5
COL17A1-206ENST00000483876 GRK7Q8WTQ7 553 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 ZCCHC14Q8WYQ9 949 aaKnown RBP5.67□□□□□ -1.5
COL17A1-206ENST00000483876 CENPIQ92674 756 aaPredicted RBP5.67□□□□□ -1.5
COL17A1-206ENST00000483876 APBB2Q92870 758 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 PPP2R3CQ969Q6 453 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 LRRC45Q96CN5 670 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 SENP8Q96LD8 212 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 ZFP42Q96MM3 310 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 MCEEQ96PE7 176 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 GAD1Q99259 594 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 TBCBQ99426 244 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 ADAM2Q99965 735 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 ACBD6Q9BR61 282 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 APOL6Q9BWW8 343 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 OSBPL8Q9BZF1 889 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 TRIM7Q9C029 511 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 LMAN2LQ9H0V9 348 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 MED4Q9NPJ6 270 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 MIOSQ9NXC5 875 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 CACNA2D2Q9NY47 1150 aa5.67□□□□□ -1.5
COL17A1-206ENST00000483876 HMGXB4Q9UGU5 601 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms