RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 KIAA1841Q6NSI8 718 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 SPOCD1Q6ZMY3 1216 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 BEND5Q7L4P6 421 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 STRADAQ7RTN6 431 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 SPRED2Q7Z698 418 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 NUP93Q8N1F7 819 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 PRELID2Q8N945 189 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 KLHL23Q8NBE8 558 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 GPR152Q8TDT2 470 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 SPATA17Q96L03 361 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 LBHD1Q9BQE6 289 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-226ENST00000483656 LRRC1Q9BTT6 524 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 MAGEB5Q9BZ81 275 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 OSBPL8Q9BZF1 889 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 ZBP1Q9H171 429 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 NMUR1Q9HB89 426 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 RXFP1Q9HBX9 757 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 AAASQ9NRG9 546 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 GPATCH2LQ9NWQ4 482 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 DDX56Q9NY93 547 aaKnown RBP10.55□□□□□ -0.72
HDAC6-226ENST00000483656 AFF4Q9UHB7 1163 aaKnown RBP10.55□□□□□ -0.72
HDAC6-226ENST00000483656 SCML2Q9UQR0 700 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 PCDHB12Q9Y5F1 795 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 hCG_1818297A0A087WSY0 165 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 GRXCR1A8MXD5 290 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 TLL1O43897 1013 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 RHOXF2BP0C7M4 288 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 CTSAP10619 480 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 RALAP11233 206 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 KRT10P13645 584 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 ATF6P18850 670 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 KDELR1P24390 212 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 PTPN7P35236 360 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 BMPR1AP36894 532 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 CDKN2BP42772 138 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 YWHAGP61981 247 aaKnown RBP eCLIP10.54□□□□□ -0.72
HDAC6-226ENST00000483656 IFRD2Q12894 506 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-226ENST00000483656 EIF4EBP2Q13542 120 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-226ENST00000483656 MTMR3Q13615 1198 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 MGAT5BQ3V5L5 792 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 FAM109BQ6ICB4 259 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-226ENST00000483656 SCYL2Q6P3W7 929 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 GPR65Q8IYL9 337 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 FAM71BQ8TC56 605 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 HDAC7Q8WUI4 952 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 TEKT4Q8WW24 435 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 EDEM1Q92611 657 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 RBM41Q96IZ5 413 aaKnown RBP10.54□□□□□ -0.72
HDAC6-226ENST00000483656 KRT12Q99456 494 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 SEPT5Q99719 369 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-226ENST00000483656 NCAPGQ9BPX3 1015 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 RHOXF2Q9BQY4 288 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 SNRNP25Q9BV90 132 aaKnown RBP10.54□□□□□ -0.72
HDAC6-226ENST00000483656 HEMGNQ9BXL5 484 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 DDX47Q9H0S4 455 aaKnown RBP10.54□□□□□ -0.72
HDAC6-226ENST00000483656 OSER1Q9NX31 292 aa10.54□□□□□ -0.72
HDAC6-226ENST00000483656 R3HDM2Q9Y2K5 976 aaKnown RBP10.54□□□□□ -0.72
HDAC6-226ENST00000483656 A0A1W2PQH9 124 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 LRRD1A4D1F6 860 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 LINC01553A4QN01 128 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 SLC38A8A6NNN8 435 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 CCDC188H7C350 402 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 I6L893 689 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-226ENST00000483656 M0QYT0 321 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 TEX28O15482 410 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 PRPSAP2O60256 369 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 IGLV3-25P01717 112 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 URODP06132 367 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 NCAM1P13591 858 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 MYOGP15173 224 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 ATF2P15336 505 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 IL4RP24394 825 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 DNAJB1P25685 340 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 DNAJB2P25686 324 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 MAGEA10P43363 369 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-226ENST00000483656 COPS2P61201 443 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 RPL10AP62906 217 aaKnown RBP10.53□□□□□ -0.72
HDAC6-226ENST00000483656 TUBB4BP68371 445 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 KRT17Q04695 432 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 SHHQ15465 462 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 CLUL1Q15846 466 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 PPP2R5EQ16537 467 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 CYP1B1Q16678 543 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 BOLA3Q53S33 107 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 ZC3H12AQ5D1E8 599 aaKnown RBP10.53□□□□□ -0.72
HDAC6-226ENST00000483656 TPGS2Q68CL5 300 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 TTC27Q6P3X3 843 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 TAC4Q86UU9 113 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 CCDC50Q8IVM0 306 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 KLHL7Q8IXQ5 586 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 GPR161Q8N6U8 529 aaKnown RBP10.53□□□□□ -0.72
HDAC6-226ENST00000483656 CCDC185Q8N715 623 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 ZNF461Q8TAF7 563 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 ADAM32Q8TC27 787 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 SPPL3Q8TCT6 385 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 DQX1Q8TE96 717 aaKnown RBP10.53□□□□□ -0.72
HDAC6-226ENST00000483656 GIPC2Q8TF65 315 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 HSPH1Q92598 858 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 PGAP3Q96FM1 320 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-226ENST00000483656 PNKPQ96T60 521 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms