RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 PDCL3Q9H2J4 239 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 MFSD1Q9H3U5 465 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 C8orf33Q9H7E9 229 aaPredicted RBP16.38■□□□□ 0.21
RPP40-206ENST00000483546 ST7Q9NRC1 585 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 ABCC13Q9NSE7 274 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 OSER1Q9NX31 292 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 TBC1D14Q9P2M4 693 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 MAN2B1O00754 1011 aa16.37■□□□□ 0.21
RPP40-206ENST00000483546 PNMA6AP0CW24 399 aaPredicted RBP16.37■□□□□ 0.21
RPP40-206ENST00000483546 LCP1P13796 627 aa16.37■□□□□ 0.21
RPP40-206ENST00000483546 IFNAR2P48551 515 aa16.37■□□□□ 0.21
RPP40-206ENST00000483546 AMPD2Q01433 879 aa16.37■□□□□ 0.21
RPP40-206ENST00000483546 ITPRIPL2Q3MIP1 535 aa16.37■□□□□ 0.21
RPP40-206ENST00000483546 FIGNQ5HY92 759 aa16.37■□□□□ 0.21
RPP40-206ENST00000483546 C10orf120Q5SQS8 335 aa16.37■□□□□ 0.21
RPP40-206ENST00000483546 BEND5Q7L4P6 421 aa16.37■□□□□ 0.21
RPP40-206ENST00000483546 BHLHA9Q7RTU4 235 aa16.37■□□□□ 0.21
RPP40-206ENST00000483546 GPIHBP1Q8IV16 184 aa16.37■□□□□ 0.21
RPP40-206ENST00000483546 SUGP1Q8IWZ8 645 aaKnown RBP16.37■□□□□ 0.21
RPP40-206ENST00000483546 FBXL6Q8N531 539 aa16.37■□□□□ 0.21
RPP40-206ENST00000483546 TMEM35BQ8NCS4 154 aa16.37■□□□□ 0.21
RPP40-206ENST00000483546 ATP2A3Q93084 1043 aa16.37■□□□□ 0.21
RPP40-206ENST00000483546 ZFRQ96KR1 1074 aaKnown RBP16.37■□□□□ 0.21
RPP40-206ENST00000483546 NELL2Q99435 816 aa16.37■□□□□ 0.21
RPP40-206ENST00000483546 DDX23Q9BUQ8 820 aaKnown RBP16.37■□□□□ 0.21
RPP40-206ENST00000483546 MIS12Q9H081 205 aa16.37■□□□□ 0.21
RPP40-206ENST00000483546 GKN1Q9NS71 199 aa16.37■□□□□ 0.21
RPP40-206ENST00000483546 CA14Q9ULX7 337 aa16.37■□□□□ 0.21
RPP40-206ENST00000483546 MRPS17Q9Y2R5 130 aaKnown RBP16.37■□□□□ 0.21
RPP40-206ENST00000483546 KRBA1A5PL33 1030 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 GFPT2O94808 682 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 FERP16591 822 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 PGFP49763 221 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 CLCN5P51795 746 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 COG7P83436 770 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 BSPRYQ5W0U4 402 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 TRIM72Q6ZMU5 477 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 RSRC2Q7L4I2 434 aaKnown RBP16.36■□□□□ 0.21
RPP40-206ENST00000483546 RALGPS2Q86X27 583 aaPredicted RBP16.36■□□□□ 0.21
RPP40-206ENST00000483546 ZDHHC17Q8IUH5 632 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 CPA6Q8N4T0 437 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 MSANTD4Q8NCY6 345 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 IPO4Q8TEX9 1081 aaKnown RBP16.36■□□□□ 0.21
RPP40-206ENST00000483546 RNF139Q8WU17 664 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 DDX1Q92499 740 aaKnown RBP16.36■□□□□ 0.21
RPP40-206ENST00000483546 PPP1R13BQ96KQ4 1090 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 LRFN3Q9BTN0 628 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 KLF16Q9BXK1 252 aaPredicted RBP16.36■□□□□ 0.21
RPP40-206ENST00000483546 OSBPL6Q9BZF3 934 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 DUS2Q9NX74 493 aaKnown RBP16.36■□□□□ 0.21
RPP40-206ENST00000483546 SMPD4Q9NXE4 827 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 CFAP97Q9P2B7 532 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 LSM7Q9UK45 103 aaKnown RBP16.36■□□□□ 0.21
RPP40-206ENST00000483546 STRIP2Q9ULQ0 834 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 SH3BP1Q9Y3L3 701 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 MIA3Q5JRA6 1907 aa16.36■□□□□ 0.21
RPP40-206ENST00000483546 FAM86C2PA6NEL3 165 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 YJEFN3A6XGL0 299 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 E7ENQ6 273 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 CBFA2T2O43439 604 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 GABBR2O75899 941 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 NFATC1O95644 943 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 LTFP02788 710 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 GLI1P08151 1106 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 ZXDBP98169 803 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 CDR2Q01850 454 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 NR1H3Q13133 447 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 RUNX3Q13761 415 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 MSANTD2Q6P1R3 559 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 ZNF852Q6ZMS4 543 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 HFE2Q6ZVN8 426 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 NOP9Q86U38 636 aaKnown RBP16.35■□□□□ 0.21
RPP40-206ENST00000483546 WDTC1Q8N5D0 677 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 RIN3Q8TB24 985 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 EXOC4Q96A65 974 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 TBC1D17Q9HA65 648 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 HEBP1Q9NRV9 189 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 ASNSD1Q9NWL6 643 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 CYTH4Q9UIA0 394 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 NOCTQ9UK39 431 aaKnown RBP16.35■□□□□ 0.21
RPP40-206ENST00000483546 PIAS3Q9Y6X2 628 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 F5P12259 2224 aa16.35■□□□□ 0.21
RPP40-206ENST00000483546 KANSL1LA0AUZ9 987 aa16.34■□□□□ 0.21
RPP40-206ENST00000483546 E5RJQ4 531 aa16.34■□□□□ 0.21
RPP40-206ENST00000483546 PBX1P40424 430 aa16.34■□□□□ 0.21
RPP40-206ENST00000483546 KPNA1P52294 538 aaPredicted RBP16.34■□□□□ 0.21
RPP40-206ENST00000483546 NUBP1P53384 320 aa16.34■□□□□ 0.21
RPP40-206ENST00000483546 EML3Q32P44 896 aa16.34■□□□□ 0.21
RPP40-206ENST00000483546 ASTLQ6HA08 431 aaPredicted RBP16.34■□□□□ 0.21
RPP40-206ENST00000483546 TPRG1Q6ZUI0 275 aa16.34■□□□□ 0.21
RPP40-206ENST00000483546 TOGARAM2Q6ZUX3 1019 aa16.34■□□□□ 0.21
RPP40-206ENST00000483546 HTR3DQ70Z44 454 aa16.34■□□□□ 0.21
RPP40-206ENST00000483546 PASD1Q8IV76 773 aa16.34■□□□□ 0.21
RPP40-206ENST00000483546 SCUBE3Q8IX30 993 aa16.34■□□□□ 0.21
RPP40-206ENST00000483546 C1orf131Q8NDD1 294 aaKnown RBP16.34■□□□□ 0.21
RPP40-206ENST00000483546 ZFYVE19Q96K21 471 aa16.34■□□□□ 0.21
RPP40-206ENST00000483546 CPXM1Q96SM3 734 aa16.34■□□□□ 0.21
RPP40-206ENST00000483546 ANP32EQ9BTT0 268 aa16.34■□□□□ 0.21
RPP40-206ENST00000483546 DCLK3Q9C098 648 aa16.34■□□□□ 0.21
RPP40-206ENST00000483546 TTYH3Q9C0H2 523 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms