RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 YWHAGP61981 247 aaKnown RBP eCLIP18.91■□□□□ 0.62
HDAC6-225ENST00000483506 TCF15Q12870 199 aa18.91■□□□□ 0.62
HDAC6-225ENST00000483506 DHX40Q8IX18 779 aaKnown RBP18.91■□□□□ 0.62
HDAC6-225ENST00000483506 AOPEPQ8N6M6 819 aa18.91■□□□□ 0.62
HDAC6-225ENST00000483506 STK32AQ8WU08 396 aa18.91■□□□□ 0.62
HDAC6-225ENST00000483506 NACA2Q9H009 215 aa18.91■□□□□ 0.62
HDAC6-225ENST00000483506 VPS16Q9H269 839 aa18.91■□□□□ 0.62
HDAC6-225ENST00000483506 ACP6Q9NPH0 428 aa18.91■□□□□ 0.62
HDAC6-225ENST00000483506 TBC1D14Q9P2M4 693 aa18.91■□□□□ 0.62
HDAC6-225ENST00000483506 DNMT3LQ9UJW3 386 aa18.91■□□□□ 0.62
HDAC6-225ENST00000483506 DAAM1Q9Y4D1 1078 aa18.91■□□□□ 0.62
HDAC6-225ENST00000483506 FHOD1Q9Y613 1164 aa18.91■□□□□ 0.62
HDAC6-225ENST00000483506 LGALS16A8MUM7 142 aa18.9■□□□□ 0.62
HDAC6-225ENST00000483506 FOXN3O00409 490 aaPredicted RBP18.9■□□□□ 0.62
HDAC6-225ENST00000483506 GREM1O60565 184 aa18.9■□□□□ 0.62
HDAC6-225ENST00000483506 NFATC1O95644 943 aa18.9■□□□□ 0.62
HDAC6-225ENST00000483506 AMPD2Q01433 879 aa18.9■□□□□ 0.62
HDAC6-225ENST00000483506 FKBP15Q5T1M5 1219 aa18.9■□□□□ 0.62
HDAC6-225ENST00000483506 SIX6OS1Q8N1H7 587 aa18.9■□□□□ 0.62
HDAC6-225ENST00000483506 TTC8Q8TAM2 541 aa18.9■□□□□ 0.62
HDAC6-225ENST00000483506 IRGQQ8WZA9 623 aa18.9■□□□□ 0.62
HDAC6-225ENST00000483506 OTUB2Q96DC9 234 aa18.9■□□□□ 0.62
HDAC6-225ENST00000483506 IER2Q9BTL4 223 aa18.9■□□□□ 0.62
HDAC6-225ENST00000483506 LSM14BQ9BX40 385 aaKnown RBP18.9■□□□□ 0.62
HDAC6-225ENST00000483506 GANQ9H2C0 597 aa18.9■□□□□ 0.62
HDAC6-225ENST00000483506 LINC00597Q9H2U6 94 aa18.9■□□□□ 0.62
HDAC6-225ENST00000483506 PCDHGC3Q9UN70 934 aa18.9■□□□□ 0.62
HDAC6-225ENST00000483506 SIK3Q9Y2K2 1263 aa18.9■□□□□ 0.62
HDAC6-225ENST00000483506 TRDMT1O14717 391 aaKnown RBP18.89■□□□□ 0.61
HDAC6-225ENST00000483506 THAP12O43422 761 aa18.89■□□□□ 0.61
HDAC6-225ENST00000483506 FBXO21O94952 628 aa18.89■□□□□ 0.61
HDAC6-225ENST00000483506 CHRNB1P11230 501 aa18.89■□□□□ 0.61
HDAC6-225ENST00000483506 GJA4P35212 333 aa18.89■□□□□ 0.61
HDAC6-225ENST00000483506 CLCN1P35523 988 aa18.89■□□□□ 0.61
HDAC6-225ENST00000483506 PTPN5P54829 565 aa18.89■□□□□ 0.61
HDAC6-225ENST00000483506 DAOAP59103 153 aa18.89■□□□□ 0.61
HDAC6-225ENST00000483506 PTK2Q05397 1052 aa18.89■□□□□ 0.61
HDAC6-225ENST00000483506 DRAP1Q14919 205 aaPredicted RBP18.89■□□□□ 0.61
HDAC6-225ENST00000483506 SKOR2Q2VWA4 1001 aaPredicted RBP18.89■□□□□ 0.61
HDAC6-225ENST00000483506 C10orf120Q5SQS8 335 aa18.89■□□□□ 0.61
HDAC6-225ENST00000483506 DENND1BQ6P3S1 775 aa18.89■□□□□ 0.61
HDAC6-225ENST00000483506 MAMSTRQ6ZN01 415 aa18.89■□□□□ 0.61
HDAC6-225ENST00000483506 HTR3DQ70Z44 454 aa18.89■□□□□ 0.61
HDAC6-225ENST00000483506 ADGRG2Q8IZP9 1017 aa18.89■□□□□ 0.61
HDAC6-225ENST00000483506 SLC4A5Q9BY07 1137 aa18.89■□□□□ 0.61
HDAC6-225ENST00000483506 CHRDQ9H2X0 955 aa18.89■□□□□ 0.61
HDAC6-225ENST00000483506 NDRG2Q9UN36 371 aaKnown RBP18.89■□□□□ 0.61
HDAC6-225ENST00000483506 CACNA1IQ9P0X4 2223 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 SYCE3A1L190 88 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 YJEFN3A6XGL0 299 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 SMTNL1A8MU46 457 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 E7ENQ6 273 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 CYP17A1P05093 508 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 USP8P40818 1118 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 RGS7P49802 495 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 ZNF165P49910 485 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 BPIFB4P59827 614 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 GOLGA8FQ08AF8 430 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 GOLGA8DPQ0D2H9 430 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 NR1H3Q13133 447 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 CCINQ13939 588 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 GAB4Q2WGN9 574 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 TMEM196Q5HYL7 178 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 TTC16Q8NEE8 873 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 WBP2Q969T9 261 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 ERGIC2Q96RQ1 377 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 STK33Q9BYT3 514 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 IRF2BPLQ9H1B7 796 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 LHX5Q9H2C1 402 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 SH3BP1Q9Y3L3 701 aa18.88■□□□□ 0.61
HDAC6-225ENST00000483506 F8VZ95 297 aa18.87■□□□□ 0.61
HDAC6-225ENST00000483506 MDM4O15151 490 aa18.87■□□□□ 0.61
HDAC6-225ENST00000483506 PNMA6AP0CW24 399 aaPredicted RBP18.87■□□□□ 0.61
HDAC6-225ENST00000483506 ATP1A3P13637 1013 aa18.87■□□□□ 0.61
HDAC6-225ENST00000483506 LCP1P13796 627 aa18.87■□□□□ 0.61
HDAC6-225ENST00000483506 CDK11BP21127 795 aaKnown RBP18.87■□□□□ 0.61
HDAC6-225ENST00000483506 ACADSBP45954 432 aa18.87■□□□□ 0.61
HDAC6-225ENST00000483506 RAPGEF1Q13905 1077 aa18.87■□□□□ 0.61
HDAC6-225ENST00000483506 LRRC32Q14392 662 aa18.87■□□□□ 0.61
HDAC6-225ENST00000483506 IQCB1Q15051 598 aa18.87■□□□□ 0.61
HDAC6-225ENST00000483506 PON2Q15165 354 aa18.87■□□□□ 0.61
HDAC6-225ENST00000483506 DGKKQ5KSL6 1271 aa18.87■□□□□ 0.61
HDAC6-225ENST00000483506 BSPRYQ5W0U4 402 aa18.87■□□□□ 0.61
HDAC6-225ENST00000483506 Q6ZNB5 142 aa18.87■□□□□ 0.61
HDAC6-225ENST00000483506 TMEM110Q86TL2 294 aa18.87■□□□□ 0.61
HDAC6-225ENST00000483506 SLC47A2Q86VL8 602 aa18.87■□□□□ 0.61
HDAC6-225ENST00000483506 SYNPOQ8N3V7 929 aa18.87■□□□□ 0.61
HDAC6-225ENST00000483506 NDRG1Q92597 394 aaKnown RBP18.87■□□□□ 0.61
HDAC6-225ENST00000483506 ABCC13Q9NSE7 274 aa18.87■□□□□ 0.61
HDAC6-225ENST00000483506 OLA1Q9NTK5 396 aaKnown RBP18.87■□□□□ 0.61
HDAC6-225ENST00000483506 CYTH4Q9UIA0 394 aa18.87■□□□□ 0.61
HDAC6-225ENST00000483506 NUDT5Q9UKK9 219 aa18.87■□□□□ 0.61
HDAC6-225ENST00000483506 KLK7P49862 253 aa18.86■□□□□ 0.61
HDAC6-225ENST00000483506 JAM2P57087 298 aa18.86■□□□□ 0.61
HDAC6-225ENST00000483506 COG7P83436 770 aa18.86■□□□□ 0.61
HDAC6-225ENST00000483506 DHCR24Q15392 516 aa18.86■□□□□ 0.61
HDAC6-225ENST00000483506 BTBD8Q5XKL5 378 aa18.86■□□□□ 0.61
HDAC6-225ENST00000483506 MSANTD2Q6P1R3 559 aa18.86■□□□□ 0.61
HDAC6-225ENST00000483506 C1orf210Q8IVY1 113 aa18.86■□□□□ 0.61
HDAC6-225ENST00000483506 BBS7Q8IWZ6 715 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms