RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 LRFN3Q9BTN0 628 aa17.07■□□□□ 0.32
COL2A1-206ENST00000483376 TRIM62Q9BVG3 475 aa17.07■□□□□ 0.32
COL2A1-206ENST00000483376 KLF16Q9BXK1 252 aaPredicted RBP17.07■□□□□ 0.32
COL2A1-206ENST00000483376 OSBPL6Q9BZF3 934 aa17.07■□□□□ 0.32
COL2A1-206ENST00000483376 TTYH3Q9C0H2 523 aa17.07■□□□□ 0.32
COL2A1-206ENST00000483376 NLRC4Q9NPP4 1024 aa17.07■□□□□ 0.32
COL2A1-206ENST00000483376 ABCC13Q9NSE7 274 aa17.07■□□□□ 0.32
COL2A1-206ENST00000483376 CYTH4Q9UIA0 394 aa17.07■□□□□ 0.32
COL2A1-206ENST00000483376 NOCTQ9UK39 431 aaKnown RBP17.07■□□□□ 0.32
COL2A1-206ENST00000483376 MYO16Q9Y6X6 1858 aa17.07■□□□□ 0.32
COL2A1-206ENST00000483376 YJEFN3A6XGL0 299 aa17.06■□□□□ 0.32
COL2A1-206ENST00000483376 E7ENQ6 273 aa17.06■□□□□ 0.32
COL2A1-206ENST00000483376 MAN2B1O00754 1011 aa17.06■□□□□ 0.32
COL2A1-206ENST00000483376 RGS7P49802 495 aa17.06■□□□□ 0.32
COL2A1-206ENST00000483376 UBASH3AP57075 661 aa17.06■□□□□ 0.32
COL2A1-206ENST00000483376 GOLGA8FQ08AF8 430 aa17.06■□□□□ 0.32
COL2A1-206ENST00000483376 GOLGA8DPQ0D2H9 430 aa17.06■□□□□ 0.32
COL2A1-206ENST00000483376 BSPRYQ5W0U4 402 aa17.06■□□□□ 0.32
COL2A1-206ENST00000483376 MSANTD2Q6P1R3 559 aa17.06■□□□□ 0.32
COL2A1-206ENST00000483376 NOP9Q86U38 636 aaKnown RBP17.06■□□□□ 0.32
COL2A1-206ENST00000483376 TMEM35BQ8NCS4 154 aa17.06■□□□□ 0.32
COL2A1-206ENST00000483376 BAP1Q92560 729 aa17.06■□□□□ 0.32
COL2A1-206ENST00000483376 ATP2A3Q93084 1043 aa17.06■□□□□ 0.32
COL2A1-206ENST00000483376 PBXIP1Q96AQ6 731 aa17.06■□□□□ 0.32
COL2A1-206ENST00000483376 NELL2Q99435 816 aa17.06■□□□□ 0.32
COL2A1-206ENST00000483376 NACA2Q9H009 215 aa17.06■□□□□ 0.32
COL2A1-206ENST00000483376 GKN1Q9NS71 199 aa17.06■□□□□ 0.32
COL2A1-206ENST00000483376 TBC1D14Q9P2M4 693 aa17.06■□□□□ 0.32
COL2A1-206ENST00000483376 FAM86C2PA6NEL3 165 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 SHISA7A6NL88 538 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 GREM1O60565 184 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 GFPT2O94808 682 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 TBX18O95935 607 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 GLI1P08151 1106 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 CCDC172P0C7W6 258 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 LCP1P13796 627 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 NUBP1P53384 320 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 COG7P83436 770 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 CDR2Q01850 454 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 EML3Q32P44 896 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 ITPRIPL2Q3MIP1 535 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 C10orf120Q5SQS8 335 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 BTBD8Q5XKL5 378 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 CWF19L1Q69YN2 538 aaKnown RBP17.05■□□□□ 0.32
COL2A1-206ENST00000483376 TRIM72Q6ZMU5 477 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 HTR3DQ70Z44 454 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 CACNA2D4Q7Z3S7 1137 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 RALGPS2Q86X27 583 aaPredicted RBP17.05■□□□□ 0.32
COL2A1-206ENST00000483376 ZDHHC17Q8IUH5 632 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 GPIHBP1Q8IV16 184 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 CSGALNACT1Q8TDX6 532 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 NUP58Q9BVL2 599 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 HPS4Q9NQG7 708 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 HEBP1Q9NRV9 189 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 ASNSD1Q9NWL6 643 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 DUS2Q9NX74 493 aaKnown RBP17.05■□□□□ 0.32
COL2A1-206ENST00000483376 CA14Q9ULX7 337 aa17.05■□□□□ 0.32
COL2A1-206ENST00000483376 A0A1W2PQJ5 194 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 KANSL1LA0AUZ9 987 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 E5RJQ4 531 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 PAPSS1O43252 624 aaPredicted RBP17.04■□□□□ 0.32
COL2A1-206ENST00000483376 LTFP02788 710 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 TPM3P06753 285 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 FERP16591 822 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 AOC1P19801 751 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 SCNN1AP37088 669 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 GABRB2P47870 512 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 IFNAR2P48551 515 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 RUNX3Q13761 415 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 IER5LQ5T953 404 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 ZNF852Q6ZMS4 543 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 C1orf131Q8NDD1 294 aaKnown RBP17.04■□□□□ 0.32
COL2A1-206ENST00000483376 GOLGA1Q92805 767 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 ZFYVE19Q96K21 471 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 PPP1R13BQ96KQ4 1090 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 CPXM1Q96SM3 734 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 MIS12Q9H081 205 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 MFSD1Q9H3U5 465 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 TBC1D17Q9HA65 648 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 ST7Q9NRC1 585 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 SMPD4Q9NXE4 827 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 CFAP97Q9P2B7 532 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 STRIP2Q9ULQ0 834 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 MRPS17Q9Y2R5 130 aaKnown RBP17.04■□□□□ 0.32
COL2A1-206ENST00000483376 PIAS3Q9Y6X2 628 aa17.04■□□□□ 0.32
COL2A1-206ENST00000483376 ITIH6Q6UXX5 1313 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 NFATC1O95644 943 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 CYP1A1P04798 512 aaPredicted RBP17.03■□□□□ 0.32
COL2A1-206ENST00000483376 AMPD2Q01433 879 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 NNTQ13423 1086 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 PTPN20Q4JDL3 420 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 ASTLQ6HA08 431 aaPredicted RBP17.03■□□□□ 0.32
COL2A1-206ENST00000483376 TPRG1Q6ZUI0 275 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 PASD1Q8IV76 773 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 SUGP1Q8IWZ8 645 aaKnown RBP17.03■□□□□ 0.32
COL2A1-206ENST00000483376 SCUBE3Q8IX30 993 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 ZNF687Q8N1G0 1237 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 CPA6Q8N4T0 437 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 ZNF397Q8NF99 534 aaPredicted RBP17.03■□□□□ 0.32
COL2A1-206ENST00000483376 IPO4Q8TEX9 1081 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms