RNA–Protein interactions for RNA: ENST00000483031.1

RPA3-207, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 641 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-207ENST00000483031 KIF20AO95235 890 aa4.22□□□□□ -1.73
RPA3-207ENST00000483031 ALPLP05186 524 aa4.22□□□□□ -1.73
RPA3-207ENST00000483031 CHRM5P08912 532 aaPredicted RBP4.22□□□□□ -1.73
RPA3-207ENST00000483031 GCLCP48506 637 aaPredicted RBP4.22□□□□□ -1.73
RPA3-207ENST00000483031 PDE1AP54750 535 aa4.22□□□□□ -1.73
RPA3-207ENST00000483031 HTRA4P83105 476 aaPredicted RBP4.22□□□□□ -1.73
RPA3-207ENST00000483031 RBMS2Q15434 407 aaKnown RBP4.22□□□□□ -1.73
RPA3-207ENST00000483031 SYDE2Q5VT97 1194 aa4.22□□□□□ -1.73
RPA3-207ENST00000483031 GALNT4Q8N4A0 578 aa4.22□□□□□ -1.73
RPA3-207ENST00000483031 CUL5Q93034 780 aa4.22□□□□□ -1.73
RPA3-207ENST00000483031 ZC3H10Q96K80 434 aaKnown RBP4.22□□□□□ -1.73
RPA3-207ENST00000483031 LYZL4Q96KX0 146 aa4.22□□□□□ -1.73
RPA3-207ENST00000483031 C1orf43Q9BWL3 253 aa4.22□□□□□ -1.73
RPA3-207ENST00000483031 SCAF8Q9UPN6 1271 aaKnown RBP4.22□□□□□ -1.73
RPA3-207ENST00000483031 PRKAB1Q9Y478 270 aa4.22□□□□□ -1.73
RPA3-207ENST00000483031 NOTCH4Q99466 2003 aa4.22□□□□□ -1.73
RPA3-207ENST00000483031 PPLO60437 1756 aa4.22□□□□□ -1.73
RPA3-207ENST00000483031 PPIP5K1Q6PFW1 1433 aa4.21□□□□□ -1.73
RPA3-207ENST00000483031 NSD3Q9BZ95 1437 aa4.21□□□□□ -1.73
RPA3-207ENST00000483031 TRIOBPQ9H2D6 2365 aa4.21□□□□□ -1.73
RPA3-207ENST00000483031 CACNA1AO00555 2505 aa4.21□□□□□ -1.74
RPA3-207ENST00000483031 CD8B2A6NJW9 211 aa4.21□□□□□ -1.74
RPA3-207ENST00000483031 RPLP2P05387 115 aaKnown RBP4.21□□□□□ -1.74
RPA3-207ENST00000483031 DPEP1P16444 411 aa4.21□□□□□ -1.74
RPA3-207ENST00000483031 PHKA1P46020 1223 aa4.21□□□□□ -1.74
RPA3-207ENST00000483031 ODF1Q14990 250 aa4.21□□□□□ -1.74
RPA3-207ENST00000483031 ABCB5Q2M3G0 1257 aa4.21□□□□□ -1.74
RPA3-207ENST00000483031 ICE2Q659A1 982 aa4.21□□□□□ -1.74
RPA3-207ENST00000483031 SFRP4Q6FHJ7 346 aaPredicted RBP4.21□□□□□ -1.74
RPA3-207ENST00000483031 PARS2Q7L3T8 475 aaKnown RBP4.21□□□□□ -1.74
RPA3-207ENST00000483031 RP9Q8TA86 221 aaKnown RBP4.21□□□□□ -1.74
RPA3-207ENST00000483031 TINAGL1Q9GZM7 467 aaPredicted RBP4.21□□□□□ -1.74
RPA3-207ENST00000483031 MCM8Q9UJA3 840 aa4.21□□□□□ -1.74
RPA3-207ENST00000483031 POLR3AO14802 1390 aaPredicted RBP4.21□□□□□ -1.74
RPA3-207ENST00000483031 LY75O60449 1722 aa4.21□□□□□ -1.74
RPA3-207ENST00000483031 KDM6AO15550 1401 aaPredicted RBP4.21□□□□□ -1.74
RPA3-207ENST00000483031 ANKRD36BQ8N2N9 1353 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 LY6G6EA0A0G2JKS1 128 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 FAM90A8PA6NJQ4 464 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 UBE2Q2LH0YL09 131 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 GABRDO14764 452 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 DSCR3O14972 297 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 XPOTO43592 962 aaKnown RBP4.2□□□□□ -1.74
RPA3-207ENST00000483031 FAM90A13PP0C7W8 464 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 FAM90A24PP0C7X0 464 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 FTH1P19P0C7X4 201 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 MYBL2P10244 700 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 RARBP10826 455 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 CYP2A6P11509 494 aaPredicted RBP4.2□□□□□ -1.74
RPA3-207ENST00000483031 PRF1P14222 555 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 MAP2K2P36507 400 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 KCNJ5P48544 419 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 PIK3CGP48736 1102 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 ADKP55263 362 aaKnown RBP4.2□□□□□ -1.74
RPA3-207ENST00000483031 SP2Q02086 613 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 MTMR1Q13613 665 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 SEMA3AQ14563 771 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 ZNF268Q14587 947 aaPredicted RBP4.2□□□□□ -1.74
RPA3-207ENST00000483031 EGFLAMQ63HQ2 1017 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 FCRL6Q6DN72 434 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 TMEM108Q6UXF1 575 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 USP37Q86T82 979 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.2□□□□□ -1.74
RPA3-207ENST00000483031 CCDC8Q9H0W5 538 aaPredicted RBP4.2□□□□□ -1.74
RPA3-207ENST00000483031 TRHDEQ9UKU6 1024 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 KIF13BQ9NQT8 1826 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 ARFGEF1Q9Y6D6 1849 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 CEP290O15078 2479 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 PIK3C2GO75747 1445 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 CASP8AP2Q9UKL3 1982 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 SBF1O95248 1867 aa4.2□□□□□ -1.74
RPA3-207ENST00000483031 ADAMTS7Q9UKP4 1686 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 ROCK1Q13464 1354 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 USP47Q96K76 1375 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 ITSN1Q15811 1721 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 FCHO1O14526 889 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 ZRANB2O95218 330 aaKnown RBP eCLIP4.19□□□□□ -1.74
RPA3-207ENST00000483031 FESP07332 822 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 MMP10P09238 476 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 KCNA3P22001 575 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 SMARCA1P28370 1054 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 NANOS2P60321 138 aaKnown RBP4.19□□□□□ -1.74
RPA3-207ENST00000483031 ERV3-1Q14264 604 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 TRIM71Q2Q1W2 868 aaKnown RBP4.19□□□□□ -1.74
RPA3-207ENST00000483031 TBC1D25Q3MII6 688 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 KIRREL2Q6UWL6 708 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 C9orf47Q6ZRZ4 202 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 C3orf20Q8ND61 904 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 CAPNS2Q96L46 248 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 PUS7Q96PZ0 661 aaKnown RBP4.19□□□□□ -1.74
RPA3-207ENST00000483031 MRPL46Q9H2W6 279 aaKnown RBP4.19□□□□□ -1.74
RPA3-207ENST00000483031 FOXP1Q9H334 677 aaPredicted RBP4.19□□□□□ -1.74
RPA3-207ENST00000483031 TMX1Q9H3N1 280 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 SLAMF7Q9NQ25 335 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 ZDHHC8Q9ULC8 765 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 ABT1Q9ULW3 272 aaKnown RBP4.19□□□□□ -1.74
RPA3-207ENST00000483031 ATP8A1Q9Y2Q0 1164 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 N4BP2Q86UW6 1770 aaPredicted RBP4.19□□□□□ -1.74
RPA3-207ENST00000483031 USP54Q70EL1 1684 aa4.19□□□□□ -1.74
RPA3-207ENST00000483031 ACEP12821 1306 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms