RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 SYCP2LQ5T4T6 812 aa13.58□□□□□ -0.24
TMEM54-206ENST00000482771 TPGS1Q6ZTW0 290 aa13.58□□□□□ -0.24
TMEM54-206ENST00000482771 PAQR9Q6ZVX9 377 aa13.58□□□□□ -0.24
TMEM54-206ENST00000482771 HTR3DQ70Z44 454 aa13.58□□□□□ -0.24
TMEM54-206ENST00000482771 SPRYD3Q8NCJ5 442 aa13.58□□□□□ -0.24
TMEM54-206ENST00000482771 XPO6Q96QU8 1125 aaKnown RBP13.58□□□□□ -0.24
TMEM54-206ENST00000482771 CGRRF1Q99675 332 aa13.58□□□□□ -0.24
TMEM54-206ENST00000482771 SLC6A17Q9H1V8 727 aa13.58□□□□□ -0.24
TMEM54-206ENST00000482771 FAM124BQ9H5Z6 455 aaPredicted RBP13.58□□□□□ -0.24
TMEM54-206ENST00000482771 CD248Q9HCU0 757 aa13.58□□□□□ -0.24
TMEM54-206ENST00000482771 RAD54BQ9Y620 910 aa13.58□□□□□ -0.24
TMEM54-206ENST00000482771 HELZP42694 1942 aaKnown RBP13.58□□□□□ -0.24
TMEM54-206ENST00000482771 WASH3PC4AMC7 463 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 PRRT4C9JH25 899 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 NEDD8-MDP1E9PL57 170 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 TGFB1I1O43294 461 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 PHACTR2O75167 634 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 GJB3O75712 270 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 TBX18O95935 607 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 ZDHHC11BP0C7U3 371 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 FTH1P19P0C7X4 201 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 GNSP15586 552 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 TUBP50607 506 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 CYP2J2P51589 502 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 SLC5A3P53794 718 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 CYP24A1Q07973 514 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 CCNI2Q6ZMN8 369 aaPredicted RBP13.57□□□□□ -0.24
TMEM54-206ENST00000482771 ZNF507Q8TCN5 953 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 SCFD1Q8WVM8 642 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 ADAMTS14Q8WXS8 1223 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 DUSP9Q99956 384 aaKnown RBP13.57□□□□□ -0.24
TMEM54-206ENST00000482771 BBS2Q9BXC9 721 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 XYLT2Q9H1B5 865 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 CD93Q9NPY3 652 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 COMMD8Q9NX08 183 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 WDR35Q9P2L0 1181 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 GPSM3Q9Y4H4 160 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 GOLGA4Q13439 2230 aaKnown RBP13.57□□□□□ -0.24
TMEM54-206ENST00000482771 ATP8B3O60423 1300 aa13.57□□□□□ -0.24
TMEM54-206ENST00000482771 TNRC6BQ9UPQ9 1833 aaKnown RBP13.57□□□□□ -0.24
TMEM54-206ENST00000482771 ITPR1Q14643 2758 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 TLR5O60602 858 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 AP1G2O75843 785 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 CISD3P0C7P0 127 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 TYRP14679 529 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 ATICP31939 592 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 SLC39A14Q15043 492 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 SOWAHCQ53LP3 525 aaPredicted RBP13.56□□□□□ -0.24
TMEM54-206ENST00000482771 WDR45BQ5MNZ6 344 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 KIAA1324Q6UXG2 1013 aaKnown RBP13.56□□□□□ -0.24
TMEM54-206ENST00000482771 TOGARAM2Q6ZUX3 1019 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 SLCO6A1Q86UG4 719 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 FAM35AQ86V20 835 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 XXYLT1Q8NBI6 393 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 FOXJ1Q92949 421 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 SYAP1Q96A49 352 aaPredicted RBP13.56□□□□□ -0.24
TMEM54-206ENST00000482771 ELMO3Q96BJ8 720 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 MRGPRX1Q96LB2 322 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 GABRG3Q99928 467 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 KLF16Q9BXK1 252 aaPredicted RBP13.56□□□□□ -0.24
TMEM54-206ENST00000482771 LRRC27Q9C0I9 530 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 CCDC86Q9H6F5 360 aaKnown RBP13.56□□□□□ -0.24
TMEM54-206ENST00000482771 SMYD3Q9H7B4 428 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 DMAP1Q9NPF5 467 aaPredicted RBP13.56□□□□□ -0.24
TMEM54-206ENST00000482771 AGPAT3Q9NRZ7 376 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 CACNA2D2Q9NY47 1150 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 SUSD2Q9UGT4 822 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 CEP192Q8TEP8 1941 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 CABIN1Q9Y6J0 2220 aa13.56□□□□□ -0.24
TMEM54-206ENST00000482771 FREM2Q5SZK8 3169 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 KNTC1P50748 2209 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 IGSF10Q6WRI0 2623 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 FAM92AA1XBS5 289 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 CACNG3O60359 315 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 GREM1O60565 184 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 BEST1O76090 585 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 CLSTN1O94985 981 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 STAU1O95793 577 aaKnown RBP13.55□□□□□ -0.24
TMEM54-206ENST00000482771 ATP5C1P36542 298 aaKnown RBP13.55□□□□□ -0.24
TMEM54-206ENST00000482771 COL28A1Q2UY09 1125 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 EPM2AIP1Q7L775 607 aaPredicted RBP13.55□□□□□ -0.24
TMEM54-206ENST00000482771 ACOT1Q86TX2 421 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 PDZD3Q86UT5 571 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 NAXDQ8IW45 347 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 NELFCDQ8IXH7 590 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 FUKQ8N0W3 1084 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 HNRNPLLQ8WVV9 542 aaKnown RBP13.55□□□□□ -0.24
TMEM54-206ENST00000482771 BHMTQ93088 406 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 SMARCD1Q96GM5 515 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 TOE1Q96GM8 510 aaKnown RBP13.55□□□□□ -0.24
TMEM54-206ENST00000482771 TNIP3Q96KP6 325 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 SMOQ99835 787 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 TRIM9Q9C026 710 aa13.55□□□□□ -0.24
TMEM54-206ENST00000482771 GZF1Q9H116 711 aaPredicted RBP13.55□□□□□ -0.24
TMEM54-206ENST00000482771 GFRA2O00451 464 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 EIF3DO15371 548 aaKnown RBP eCLIP13.54□□□□□ -0.24
TMEM54-206ENST00000482771 PDCP20941 246 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 CD6P30203 668 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 DGKGP49619 791 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 CASP4P49662 377 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms