RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 ANGPTL2Q9UKU9 493 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 CDH9Q9ULB4 789 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 MORC2Q9Y6X9 1032 aaPredicted RBP9.6□□□□□ -0.87
HLA-B-253ENST00000481849 TRDMT1O14717 391 aaKnown RBP9.59□□□□□ -0.87
HLA-B-253ENST00000481849 POLR2DO15514 142 aaKnown RBP9.59□□□□□ -0.87
HLA-B-253ENST00000481849 ATG13O75143 517 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 PPP6R2O75170 966 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 RPP40O75818 363 aaKnown RBP9.59□□□□□ -0.87
HLA-B-253ENST00000481849 CST3P01034 146 aaPredicted RBP9.59□□□□□ -0.87
HLA-B-253ENST00000481849 HSP90AA1P07900 732 aaKnown RBP9.59□□□□□ -0.87
HLA-B-253ENST00000481849 CCDC192P0DO97 292 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 BMP4P12644 408 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 HDCP19113 662 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 WARSP23381 471 aaKnown RBP9.59□□□□□ -0.87
HLA-B-253ENST00000481849 ANXA13P27216 316 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 CNR2P34972 360 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 GNL1P36915 607 aaPredicted RBP9.59□□□□□ -0.87
HLA-B-253ENST00000481849 ME1P48163 572 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 TNNC1P63316 161 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 AMPD2Q01433 879 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 CYP24A1Q07973 514 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 VAC14Q08AM6 782 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 ZNF268Q14587 947 aaPredicted RBP9.59□□□□□ -0.87
HLA-B-253ENST00000481849 ZNF77Q15935 545 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 WDR72Q3MJ13 1102 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 PRR23CQ6ZRP0 262 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 DENND5BQ6ZUT9 1274 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 EPM2AIP1Q7L775 607 aaPredicted RBP9.59□□□□□ -0.87
HLA-B-253ENST00000481849 DPH6Q7L8W6 267 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 GRAMD1CQ8IYS0 662 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 FSIP1Q8NA03 581 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 RPLP0P6Q8NHW5 317 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 ZNF507Q8TCN5 953 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 OSCP1Q8WVF1 389 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 SCFD1Q8WVM8 642 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 EDARADDQ8WWZ3 215 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 ELMO3Q96BJ8 720 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 PCED1BQ96HM7 432 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 FUBP3Q96I24 572 aaKnown RBP eCLIP9.59□□□□□ -0.87
HLA-B-253ENST00000481849 CGRRF1Q99675 332 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 C7orf25Q9BPX7 421 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 RTKNQ9BST9 563 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 ARRDC1-AS1Q9H2J1 176 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 CUEDC2Q9H467 287 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 DPEP3Q9H4B8 488 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 KIAA1586Q9HCI6 787 aa9.59□□□□□ -0.87
HLA-B-253ENST00000481849 ATXN7L1Q9ULK2 861 aaPredicted RBP9.59□□□□□ -0.87
HLA-B-253ENST00000481849 MYH11P35749 1972 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 ANTXRLA6NF34 631 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 F8VP50 259 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 EIF3DO15371 548 aaKnown RBP eCLIP9.58□□□□□ -0.88
HLA-B-253ENST00000481849 PHACTR2O75167 634 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 YEATS4O95619 227 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 DRD1P21728 446 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 MAGEA11P43364 429 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 CASP4P49662 377 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 CACNA2D1P54289 1103 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 SEC13P55735 322 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 MYL6P60660 151 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 TRPC3Q13507 836 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 CUL4BQ13620 913 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 PSMD6Q15008 389 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 SF3A2Q15428 464 aaKnown RBP9.58□□□□□ -0.88
HLA-B-253ENST00000481849 CSRP2Q16527 193 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 EML3Q32P44 896 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 UNC13DQ70J99 1090 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 KBTBD6Q86V97 674 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 XXYLT1Q8NBI6 393 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 MYCBPAPQ8TBZ2 947 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 SPATA18Q8TC71 538 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 GAB3Q8WWW8 586 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 EZH1Q92800 747 aaPredicted RBP9.58□□□□□ -0.88
HLA-B-253ENST00000481849 CD101Q93033 1021 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 ATP2A3Q93084 1043 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 SMOC1Q9H4F8 434 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 SMPD4Q9NXE4 827 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 FAM13BQ9NYF5 915 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 TRPM5Q9NZQ8 1165 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 GCNT4Q9P109 453 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 MKL2Q9ULH7 1088 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 INVSQ9Y283 1065 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 NME7Q9Y5B8 376 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 CACNA1IQ9P0X4 2223 aa9.58□□□□□ -0.88
HLA-B-253ENST00000481849 FREM2Q5SZK8 3169 aa9.57□□□□□ -0.88
HLA-B-253ENST00000481849 FBN2P35556 2912 aa9.57□□□□□ -0.88
HLA-B-253ENST00000481849 A8MXQ7 604 aa9.57□□□□□ -0.88
HLA-B-253ENST00000481849 LEFTY2O00292 366 aa9.57□□□□□ -0.88
HLA-B-253ENST00000481849 CLDN5O00501 218 aa9.57□□□□□ -0.88
HLA-B-253ENST00000481849 DCLK1O15075 740 aa9.57□□□□□ -0.88
HLA-B-253ENST00000481849 EXOC3O60645 756 aa9.57□□□□□ -0.88
HLA-B-253ENST00000481849 ZSCAN22P10073 491 aaPredicted RBP9.57□□□□□ -0.88
HLA-B-253ENST00000481849 PTPN1P18031 435 aaKnown RBP9.57□□□□□ -0.88
HLA-B-253ENST00000481849 AMPD1P23109 780 aa9.57□□□□□ -0.88
HLA-B-253ENST00000481849 HOXA6P31267 233 aa9.57□□□□□ -0.88
HLA-B-253ENST00000481849 ABL2P42684 1182 aa9.57□□□□□ -0.88
HLA-B-253ENST00000481849 PLA2G4AP47712 749 aa9.57□□□□□ -0.88
HLA-B-253ENST00000481849 RAP1GAPP47736 663 aa9.57□□□□□ -0.88
HLA-B-253ENST00000481849 CDH8P55286 799 aa9.57□□□□□ -0.88
HLA-B-253ENST00000481849 SNRPNP63162 240 aaKnown RBP9.57□□□□□ -0.88
HLA-B-253ENST00000481849 ZXDBP98169 803 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms