RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 MRPS5P82675 430 aaKnown RBP14.88□□□□□ -0.03
CCDC78-211ENST00000481804 SMAD1Q15797 465 aaKnown RBP14.88□□□□□ -0.03
CCDC78-211ENST00000481804 MARK2Q7KZI7 788 aaKnown RBP14.88□□□□□ -0.03
CCDC78-211ENST00000481804 RSPH3Q86UC2 560 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 NSUN6Q8TEA1 469 aaKnown RBP14.88□□□□□ -0.03
CCDC78-211ENST00000481804 EPAS1Q99814 870 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 ASNSD1Q9NWL6 643 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 CHADO15335 359 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 PRPSAP2O60256 369 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 STBD1O95210 358 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 IL1BP01584 269 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 CRABP2P29373 138 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 KCNJ11Q14654 390 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 RABGAP1LQ5R372 815 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 DENND5BQ6ZUT9 1274 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 SH2D5Q6ZV89 423 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 WDR49Q8IV35 697 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 BRSK2Q8IWQ3 736 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 NME8Q8N427 588 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 USP6NLQ92738 828 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 ATG4CQ96DT6 458 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 TRIM56Q9BRZ2 755 aaKnown RBP14.88□□□□□ -0.03
CCDC78-211ENST00000481804 PORCNQ9H237 461 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 RPAP3Q9H6T3 665 aaPredicted RBP14.88□□□□□ -0.03
CCDC78-211ENST00000481804 GPAMQ9HCL2 828 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 S100A14Q9HCY8 104 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 ZNF302Q9NR11 478 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 DDX43Q9NXZ2 648 aaKnown RBP14.88□□□□□ -0.03
CCDC78-211ENST00000481804 PLA2G4CQ9UP65 541 aa14.88□□□□□ -0.03
CCDC78-211ENST00000481804 LOC100653049A0A140TA62 436 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 LYPLA1O75608 230 aaPredicted RBP14.87□□□□□ -0.03
CCDC78-211ENST00000481804 GRAP2O75791 330 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 KRT34O76011 436 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 TNNC2P02585 160 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 COPAP53621 1224 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 AP3M2P53677 418 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 BCAR1P56945 870 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 RPL10AP62906 217 aaKnown RBP14.87□□□□□ -0.03
CCDC78-211ENST00000481804 STKLD1Q8NE28 680 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 PPP4R1Q8TF05 950 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 JDP2Q8WYK2 163 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 EZH1Q92800 747 aaPredicted RBP14.87□□□□□ -0.03
CCDC78-211ENST00000481804 NDNQ99608 321 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 THAP1Q9NVV9 213 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 SIRPGQ9P1W8 387 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 RIPK3Q9Y572 518 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 MAFGO15525 162 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 APOEP02649 317 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 PROCP04070 461 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 BPGMP07738 259 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 SRGAP2CP0DJJ0 459 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 CSH1P0DML2 217 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 CSH2P0DML3 217 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 PDE1BQ01064 536 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 NOMO1Q15155 1222 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 HSF5Q4G112 596 aaPredicted RBP14.87□□□□□ -0.03
CCDC78-211ENST00000481804 FASTKD1Q53R41 847 aaKnown RBP14.87□□□□□ -0.03
CCDC78-211ENST00000481804 RALGPS1Q5JS13 557 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 SNRNP48Q6IEG0 339 aaKnown RBP14.87□□□□□ -0.03
CCDC78-211ENST00000481804 C16orf46Q6P387 395 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 CCDC106Q9BWC9 280 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 IL1RAPL1Q9NZN1 696 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 NRXN2Q9P2S2 1712 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.87□□□□□ -0.03
CCDC78-211ENST00000481804 M0QYV0 167 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 RFPL1O75677 317 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 TRUB2O95900 331 aaKnown RBP14.87□□□□□ -0.03
CCDC78-211ENST00000481804 RBL1P28749 1068 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 CDH8P55286 799 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 SPDYE2Q495Y8 402 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.87□□□□□ -0.03
CCDC78-211ENST00000481804 TMCO4Q5TGY1 634 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 RSBN1LQ6PCB5 846 aaPredicted RBP14.87□□□□□ -0.03
CCDC78-211ENST00000481804 SHKBP1Q8TBC3 707 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 GDPD5Q8WTR4 605 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 CDHR1Q96JP9 859 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 MMP19Q99542 508 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 KLHL4Q9C0H6 718 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 C20orf27Q9GZN8 174 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 IFT122Q9HBG6 1241 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 PCDHGC3Q9UN70 934 aa14.87□□□□□ -0.03
CCDC78-211ENST00000481804 CNTNAP1P78357 1384 aa14.86□□□□□ -0.03
CCDC78-211ENST00000481804 F5H423 210 aaPredicted RBP14.86□□□□□ -0.03
CCDC78-211ENST00000481804 OATP04181 439 aa14.86□□□□□ -0.03
CCDC78-211ENST00000481804 ERBB2P04626 1255 aa14.86□□□□□ -0.03
CCDC78-211ENST00000481804 SUPT20HL2P0C7V6 817 aa14.86□□□□□ -0.03
CCDC78-211ENST00000481804 MAP7Q14244 749 aa14.86□□□□□ -0.03
CCDC78-211ENST00000481804 SUPT20HL1Q3ZLR7 823 aa14.86□□□□□ -0.03
CCDC78-211ENST00000481804 TCHHL1Q5QJ38 904 aaPredicted RBP14.86□□□□□ -0.03
CCDC78-211ENST00000481804 TRMT10BQ6PF06 316 aaKnown RBP14.86□□□□□ -0.03
CCDC78-211ENST00000481804 ACAD11Q709F0 780 aa14.86□□□□□ -0.03
CCDC78-211ENST00000481804 MAP7D3Q8IWC1 876 aa14.86□□□□□ -0.03
CCDC78-211ENST00000481804 EFCAB3Q8N7B9 438 aa14.86□□□□□ -0.03
CCDC78-211ENST00000481804 NGRNQ9NPE2 291 aaKnown RBP14.86□□□□□ -0.03
CCDC78-211ENST00000481804 GPATCH2LQ9NWQ4 482 aa14.86□□□□□ -0.03
CCDC78-211ENST00000481804 DNAJB4Q9UDY4 337 aa14.86□□□□□ -0.03
CCDC78-211ENST00000481804 CYTH4Q9UIA0 394 aa14.86□□□□□ -0.03
CCDC78-211ENST00000481804 CREB3O43889 395 aa14.86□□□□□ -0.03
CCDC78-211ENST00000481804 EDN1P05305 212 aa14.86□□□□□ -0.03
CCDC78-211ENST00000481804 KCNA4P22459 653 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms